Difference between revisions of "Tiso gene 16579"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-3-HYDROXY-BUTYRYL-COA 2-METHYL-3-HYDROXY-BUTYRYL-COA] == * smiles: ** CC(C(=O)SCCNC(=O...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYADENYLATE-KINASE-RXN DEOXYADENYLATE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-3-HYDROXY-BUTYRYL-COA 2-METHYL-3-HYDROXY-BUTYRYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYADENYLATE-KINASE-RXN DEOXYADENYLATE-KINASE-RXN] ==
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* smiles:
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* direction:
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** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C(C)O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=PEKYNTFSOBAABV-LQUDNSJZSA-J
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** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
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* common name:
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** [http://enzyme.expasy.org/EC/2.7.4.11 EC-2.7.4.11]
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** (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
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* molecular weight:
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** 863.619   
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* Synonym(s):
 
* Synonym(s):
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** 2-methyl-3-hydroxybutyryl-CoA
 
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** (2S,3S)-3-hydroxy-2-methylbutyryl-CoA
 
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** (S)-3-hydroxy-2-methylbutyryl-CoA
 
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** 3-hydroxy-2-methylbutyryl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[DAMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DADP]][c] '''+''' 1 [[ADP]][c]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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* With common name(s):
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* [[HMNOS]]
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** 1 dAMP[c] '''+''' 1 ATP[c] '''=>''' 1 dADP[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5837]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_12257]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_19036]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_5388]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5839]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5387]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_805]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657672 90657672]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23100 23100]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15449 15449]
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** [http://www.genome.jp/dbget-bin/www_bget?R01547 R01547]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04405 C04405]
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{{#set: ec number=EC-2.7.4.13}}
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* HMDB : HMDB01356
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{{#set: ec number=EC-2.7.4.11}}
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{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C(C)O}}
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{{#set: gene associated=Tiso_gene_5837|Tiso_gene_12257|Tiso_gene_19036|Tiso_gene_5388|Tiso_gene_5839|Tiso_gene_5387|Tiso_gene_805}}
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{{#set: inchi key=InChIKey=PEKYNTFSOBAABV-LQUDNSJZSA-J}}
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{{#set: in pathway=PWY-7224}}
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{{#set: common name=(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=863.619    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=2-methyl-3-hydroxybutyryl-CoA|(2S,3S)-3-hydroxy-2-methylbutyryl-CoA|(S)-3-hydroxy-2-methylbutyryl-CoA|3-hydroxy-2-methylbutyryl-CoA}}
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{{#set: reconstruction source=creinhardtii|synechocystis}}
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{{#set: consumed or produced by=TIGLYLCOA-HYDROXY-RXN|HMNOS}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:18, 10 January 2018

Reaction DEOXYADENYLATE-KINASE-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dAMP[c] + 1 ATP[c] => 1 dADP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






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