Difference between revisions of "CPD-535"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-ACP-REDUCT-NADPH-RXN ENOYL-ACP-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8895 == * left end position: ** 296 * transcription direction: ** POSITIVE * right end position: ** 1311 * centisome position: ** 3.0250382...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-ACP-REDUCT-NADPH-RXN ENOYL-ACP-REDUCT-NADPH-RXN] ==
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== Gene Tiso_gene_8895 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 296
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* common name:
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* transcription direction:
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** 2,3,4-saturated fatty acyl-[acp] dehydrogenase
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** POSITIVE
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** polyketide_synthase
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* right end position:
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* ec number:
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** 1311
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** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.3.1.104 EC-1.3.1.104]
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** 3.0250382   
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a trans-2-enoyl-[acyl-carrier protein][c] '''=>''' 1 NADP+[c] '''+''' 1 a 2,3,4-saturated fatty acyl-[acp][c]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-11201]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=296}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01404 R01404]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=1311}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: centisome position=3.0250382    }}
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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{{#set: reaction associated=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN|RXN-11201}}
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2,3,4-saturated fatty acyl-[acp] dehydrogenase}}
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{{#set: common name=polyketide_synthase}}
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{{#set: ec number=EC-1.3.1.39}}
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{{#set: ec number=EC-1.3.1.104}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-1.3.1.10}}
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{{#set: gene associated=Tiso_gene_10876|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_500}}
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{{#set: in pathway=FASYN-ELONG-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:19, 10 January 2018

Gene Tiso_gene_8895

  • left end position:
    • 296
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1311
  • centisome position:
    • 3.0250382
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-535&oldid=17251"