Difference between revisions of "ITP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-148 RXN1F-148] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16637 RXN-16637] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidyl-trna_hydrolase * e...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-148 RXN1F-148] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16637 RXN-16637] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** peptidyl-trna_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD1F-115]][c] '''=>''' 1 [[CPD1F-118]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Charged-CYS-tRNAs]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 δ-carotene[c] '''=>''' 1 α-carotene[c]
+
** 1 H2O[c] '''+''' 1 an L-cysteinyl-[tRNAcys][c] '''=>''' 1 H+[c] '''+''' 1 a tRNAcys[c] '''+''' 1 L-cysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8263]]
+
* [[Tiso_gene_14300]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
−
** [[pantograph]]-[[esiliculosus]]
+
***EC-NUMBER
−
* [[Tiso_gene_4457]]
+
* [[Tiso_gene_7443]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_6282]]
+
***EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
* [[Tiso_gene_13800]]
−
* [[Tiso_gene_3577]]
+
** EXPERIMENTAL_ANNOTATION
−
** [[pantograph]]-[[esiliculosus]]
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_11980]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_1547]]
+
−
** [[pantograph]]-[[athaliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5947]], lutein biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5947 PWY-5947]
+
* [[PWY-6308]], L-cysteine biosynthesis II (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6308 PWY-6308]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* [[annotation]]:
−
** [[pantograph]]:
+
** [[pathwaytools]]:
−
*** [[creinhardtii]]
+
*** [[experimental_annotation]]
−
*** [[esiliculosus]]
+
*** [[in-silico_annotation]]
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06962 R06962]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-5.5.1.19}}
+
{{#set: common name=peptidyl-trna_hydrolase}}
−
{{#set: gene associated=Tiso_gene_8263|Tiso_gene_4457|Tiso_gene_6282|Tiso_gene_3577|Tiso_gene_11980|Tiso_gene_1547}}
+
{{#set: ec number=EC-3.1.1.29}}
−
{{#set: in pathway=PWY-5947}}
+
{{#set: gene associated=Tiso_gene_14300|Tiso_gene_7443|Tiso_gene_13800}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-6308}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:20, 10 January 2018

Reaction RXN-16637

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peptidyl-trna_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 an L-cysteinyl-[tRNAcys][c] => 1 H+[c] + 1 a tRNAcys[c] + 1 L-cysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6308, L-cysteine biosynthesis II (tRNA-dependent): PWY-6308
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ITP&oldid=17290"