Difference between revisions of "Tiso gene 3609"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTCYSLIG-RXN GLUTCYSLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glutamate_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1372 == * left end position: ** 3148 * transcription direction: ** POSITIVE * right end position: ** 9745 * centisome position: ** 13.10410...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTCYSLIG-RXN GLUTCYSLIG-RXN] ==
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== Gene Tiso_gene_1372 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3148
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** glutamate_cysteine_ligase
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* right end position:
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* ec number:
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** 9745
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** [http://enzyme.expasy.org/EC/6.3.2.2 EC-6.3.2.2]
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* centisome position:
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** 13.104108   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[VALINE--TRNA-LIGASE-RXN]]
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** 1 [[GLT]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GAMMA-GLUTAMYLCYSTEINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** experimental_annotation
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* With common name(s):
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***ec-number
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** 1 L-glutamate[c] '''+''' 1 L-cysteine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 γ-L-glutamyl-L-cysteine[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13793]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14211]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[TRNA-CHARGING-PWY]]
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7255]], ergothioneine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7255 PWY-7255]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[GLUTATHIONESYN-PWY]], glutathione biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONESYN-PWY GLUTATHIONESYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6840]], homoglutathione biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6840 PWY-6840]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3148}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13285 13285]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=9745}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00894 R00894]
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{{#set: centisome position=13.104108    }}
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* UNIPROT:
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{{#set: reaction associated=VALINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/P19468 P19468]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/Q56277 Q56277]
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** [http://www.uniprot.org/uniprot/Q9JZI4 Q9JZI4]
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** [http://www.uniprot.org/uniprot/Q9JU83 Q9JU83]
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** [http://www.uniprot.org/uniprot/P48507 P48507]
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** [http://www.uniprot.org/uniprot/P48506 P48506]
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** [http://www.uniprot.org/uniprot/P32477 P32477]
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** [http://www.uniprot.org/uniprot/P0A6W9 P0A6W9]
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** [http://www.uniprot.org/uniprot/O22493 O22493]
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** [http://www.uniprot.org/uniprot/P46309 P46309]
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** [http://www.uniprot.org/uniprot/Q9TY17 Q9TY17]
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** [http://www.uniprot.org/uniprot/Q09768 Q09768]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=glutamate_cysteine_ligase}}
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{{#set: ec number=EC-6.3.2.2}}
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{{#set: gene associated=Tiso_gene_13793|Tiso_gene_14211}}
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{{#set: in pathway=PWY-7255|GLUTATHIONESYN-PWY|PWY-6840}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:20, 10 January 2018

Gene Tiso_gene_1372

  • left end position:
    • 3148
  • transcription direction:
    • POSITIVE
  • right end position:
    • 9745
  • centisome position:
    • 13.104108
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3609&oldid=17328"