Difference between revisions of "Tiso gene 6004"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrouridine synthase **...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRITE NITRITE] == * smiles: ** N([O-])=O * inchi key: ** InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRITE NITRITE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** N([O-])=O
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* inchi key:
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** InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M
 
* common name:
 
* common name:
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** dihydrouridine synthase
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** nitrite
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** trna-dihydrouridine_synthase
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* molecular weight:
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* ec number:
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** 46.005   
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** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
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* Synonym(s):
 
* Synonym(s):
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** NO2
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** NO2-
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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** 1 [[tRNA-uridines]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[tRNA-Dihydrouridines]][c]
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* [[TRANS-RXN-137]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 a uridine in tRNA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a 5,6-dihydrouridine in tRNA[c]
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* [[TRANS-RXN-137]]
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* [[RXN-3661]]
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== Genes associated with this reaction  ==
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* [[NITRATE-REDUCTASE-NADH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_8241]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15416]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15890]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5731]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15286]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8242]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7714]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15154]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12147]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4505]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15285]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 7697-37-2
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{{#set: common name=dihydrouridine synthase}}
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* CAS : 14797-65-0
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{{#set: common name=trna-dihydrouridine_synthase}}
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* METABOLIGHTS : MTBLC16301
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{{#set: ec number=EC-1.1.1}}
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* PUBCHEM:
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{{#set: gene associated=Tiso_gene_8241|Tiso_gene_15416|Tiso_gene_15890|Tiso_gene_5731|Tiso_gene_15286|Tiso_gene_8242|Tiso_gene_7714|Tiso_gene_15154|Tiso_gene_12147|Tiso_gene_4505|Tiso_gene_15285}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=946 946]
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{{#set: in pathway=}}
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* HMDB : HMDB02786
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{{#set: reconstruction category=orthology}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00088 C00088]
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{{#set: reconstruction source=esiliculosus}}
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* CHEMSPIDER:
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{{#set: reconstruction category=annotation}}
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** [http://www.chemspider.com/Chemical-Structure.921.html 921]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEBI:
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16301 16301]
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* BIGG : no2
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{{#set: smiles=N([O-])=O}}
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{{#set: inchi key=InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M}}
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{{#set: common name=nitrite}}
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{{#set: molecular weight=46.005    }}
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{{#set: common name=NO2|NO2-}}
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{{#set: consumed by=FERREDOXIN--NITRITE-REDUCTASE-RXN|TRANS-RXN-137}}
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{{#set: produced by=TRANS-RXN-137|RXN-3661|NITRATE-REDUCTASE-NADH-RXN}}

Revision as of 17:21, 10 January 2018

Metabolite NITRITE

  • smiles:
    • N([O-])=O
  • inchi key:
    • InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M
  • common name:
    • nitrite
  • molecular weight:
    • 46.005
  • Synonym(s):
    • NO2
    • NO2-

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 7697-37-2
  • CAS : 14797-65-0
  • METABOLIGHTS : MTBLC16301
  • PUBCHEM:
  • HMDB : HMDB02786
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : no2
"N([O-])=O" cannot be used as a page name in this wiki.




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