Difference between revisions of "RXN-6081"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPID-IVA KDO-LIPID-IVA] == * smiles: ** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2802 == * left end position: ** 19798 * transcription direction: ** POSITIVE * right end position: ** 21724 * centisome position: ** 90.970...")
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPID-IVA KDO-LIPID-IVA] ==
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== Gene Tiso_gene_2802 ==
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* smiles:
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* left end position:
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** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))OP([O-])([O-])=O))
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** 19798
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* inchi key:
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* transcription direction:
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** InChIKey=GPNCBCJEDRRCDW-XFULRARUSA-I
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** POSITIVE
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* common name:
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* right end position:
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** α-Kdo-(2→6)-lipid IVA
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** 21724
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* molecular weight:
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* centisome position:
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** 1620.861    
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** 90.97092    
 
* Synonym(s):
 
* Synonym(s):
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** 3-Deoxy-D-manno-octulosonyl-lipid IV(A)
 
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** 3-deoxy-α-D-manno-oct-2-ulopyranosyl-(2->6)-2-deoxy-2-{[(3R)-3-hydroxypentadecanoyl]amino}-3-O-[(3R)-3-hydroxytetradecanoyl]-4-O-phosphono-β-D-glucopyranosyl-(1->6)-2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-α-D-glucopyranose
 
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** (KDO)-lipid IVA
 
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[KDOTRANS2-RXN]]
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* [[RXN-15556]]
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== Reaction(s) known to produce the compound ==
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** in-silico_annotation
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* [[KDOTRANS-RXN]]
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***ec-number
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== Reaction(s) of unknown directionality ==
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** in-silico_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7511]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: left end position=19798}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820572 91820572]
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{{#set: transcription direction=POSITIVE}}
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* CHEBI:
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{{#set: right end position=21724}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60364 60364]
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{{#set: centisome position=90.97092   }}
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* BIGG : kdolipid4
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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* LIGAND-CPD:
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{{#set: pathway associated=PWY-7511}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06024 C06024]
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−
{{#set: smiles=CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))OP([O-])([O-])=O))}}
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{{#set: inchi key=InChIKey=GPNCBCJEDRRCDW-XFULRARUSA-I}}
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{{#set: common name=α-Kdo-(2→6)-lipid IVA}}
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{{#set: molecular weight=1620.861   }}
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{{#set: common name=3-Deoxy-D-manno-octulosonyl-lipid IV(A)|3-deoxy-α-D-manno-oct-2-ulopyranosyl-(2->6)-2-deoxy-2-{[(3R)-3-hydroxypentadecanoyl]amino}-3-O-[(3R)-3-hydroxytetradecanoyl]-4-O-phosphono-β-D-glucopyranosyl-(1->6)-2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-α-D-glucopyranose|(KDO)-lipid IVA}}
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{{#set: consumed by=KDOTRANS2-RXN}}
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−
{{#set: produced by=KDOTRANS-RXN}}
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Revision as of 17:22, 10 January 2018

Gene Tiso_gene_2802

  • left end position:
    • 19798
  • transcription direction:
    • POSITIVE
  • right end position:
    • 21724
  • centisome position:
    • 90.97092
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-6081&oldid=17500"