Difference between revisions of "RXN0-1147"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semialdehyde...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1131 == * left end position: ** 21286 * transcription direction: ** NEGATIVE * right end position: ** 22185 * centisome position: ** 82.347...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
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== Gene Tiso_gene_1131 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 21286
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* common name:
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* transcription direction:
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** methylmalonate-semialdehyde_dehydrogenase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
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** 22185
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* centisome position:
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** 82.34748   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[2.7.1.68-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''=>''' 1 NADH[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 H+[c]
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== Pathways associated ==
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* [[PWY-6352]]
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== Genes associated with this reaction  ==
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* [[PWY-6351]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11323]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=21286}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=22185}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
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{{#set: centisome position=82.34748    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.7.1.68-RXN}}
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{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
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{{#set: pathway associated=PWY-6352|PWY-6351}}
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{{#set: ec number=EC-1.2.1.27}}
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{{#set: gene associated=Tiso_gene_11323}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:24, 10 January 2018

Gene Tiso_gene_1131

  • left end position:
    • 21286
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 22185
  • centisome position:
    • 82.34748
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-1147&oldid=17626"