Difference between revisions of "RXN-15815"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo-3-phenylpropanoate di...")
 
(Created page with "Category:Gene == Gene Tiso_gene_19367 == * left end position: ** 128 * transcription direction: ** POSITIVE * right end position: ** 194 * centisome position: ** 5.375892...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] ==
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== Gene Tiso_gene_19367 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 128
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* common name:
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* transcription direction:
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** 2-oxo-3-phenylpropanoate dioxygenase
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** POSITIVE
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** ORF
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* right end position:
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** 4-hydroxyphenylpyruvate_dioxygenase
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** 194
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27]
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** 5.375892   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HISTONE-ACETYLTRANSFERASE-RXN]]
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** 1 [[PHENYL-PYRUVATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-11495]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 2-oxo-3-phenylpropanoate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 2-hydroxyphenylacetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18976]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18328]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18977]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=128}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31107 31107]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=194}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01372 R01372]
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{{#set: centisome position=5.375892    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=HISTONE-ACETYLTRANSFERASE-RXN}}
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{{#set: common name=2-oxo-3-phenylpropanoate dioxygenase}}
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{{#set: common name=ORF}}
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{{#set: common name=4-hydroxyphenylpyruvate_dioxygenase}}
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{{#set: ec number=EC-1.13.11.27}}
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{{#set: gene associated=Tiso_gene_18976|Tiso_gene_18328|Tiso_gene_18977}}
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{{#set: in pathway=PWY-6318}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:24, 10 January 2018

Gene Tiso_gene_19367

  • left end position:
    • 128
  • transcription direction:
    • POSITIVE
  • right end position:
    • 194
  • centisome position:
    • 5.375892
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15815&oldid=17635"