Difference between revisions of "Cis-cis-D11-29-3-hydroxyC48-2-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13185 RXN-13185] == * direction: ** REVERSIBLE * common name: ** violaxanthin_de-epoxidase ** v...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13185 RXN-13185] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** violaxanthin_de-epoxidase
+
−
** violaxanthin_de-_chloroplast
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.23.5.1 EC-1.23.5.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[ASCORBATE]][c] '''+''' 1 [[CPD1F-133]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[WATER]][c] '''+''' 2 [[L-DEHYDRO-ASCORBATE]][c]
+
** 1 [[MAL]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 L-ascorbate[c] '''+''' 1 violaxanthin[c] '''+''' 2 H+[c] '''<=>''' 1 zeaxanthin[c] '''+''' 2 H2O[c] '''+''' 2 L-dehydro-ascorbate[c]
+
** 1 (S)-malate[c] '''+''' 1 NADP+[c] '''=>''' 1 pyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5666]]
+
* [[Tiso_gene_12896]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
−
***EC-NUMBER
+
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_6675]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_12200]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_1275]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_16523]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[synechocystis]]
 +
*** [[athaliana]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[in-silico_annotation]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32374 32374]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: common name=violaxanthin_de-epoxidase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
−
{{#set: common name=violaxanthin_de-_chloroplast}}
+
* UNIPROT:
−
{{#set: ec number=EC-1.23.5.1}}
+
** [http://www.uniprot.org/uniprot/P12628 P12628]
−
{{#set: gene associated=Tiso_gene_5666|Tiso_gene_1275|Tiso_gene_16523}}
+
** [http://www.uniprot.org/uniprot/P06801 P06801]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P13697 P13697]
 +
** [http://www.uniprot.org/uniprot/P16243 P16243]
 +
** [http://www.uniprot.org/uniprot/O48656 O48656]
 +
** [http://www.uniprot.org/uniprot/P22178 P22178]
 +
** [http://www.uniprot.org/uniprot/P93139 P93139]
 +
** [http://www.uniprot.org/uniprot/P34105 P34105]
 +
** [http://www.uniprot.org/uniprot/P28227 P28227]
 +
** [http://www.uniprot.org/uniprot/P36444 P36444]
 +
** [http://www.uniprot.org/uniprot/P40927 P40927]
 +
** [http://www.uniprot.org/uniprot/P37223 P37223]
 +
** [http://www.uniprot.org/uniprot/P48163 P48163]
 +
** [http://www.uniprot.org/uniprot/Q16798 Q16798]
 +
** [http://www.uniprot.org/uniprot/O50015 O50015]
 +
** [http://www.uniprot.org/uniprot/O04935 O04935]
 +
** [http://www.uniprot.org/uniprot/O04936 O04936]
 +
** [http://www.uniprot.org/uniprot/P37222 P37222]
 +
** [http://www.uniprot.org/uniprot/Q42888 Q42888]
 +
** [http://www.uniprot.org/uniprot/Q42889 Q42889]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.1.1.40}}
 +
{{#set: gene associated=Tiso_gene_12896|Tiso_gene_6675|Tiso_gene_12200}}
 +
{{#set: in pathway=PWY-241|GLUCONEO-PWY|PWY-7117}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:24, 10 January 2018

Reaction MALIC-NADP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-malate[c] + 1 NADP+[c] => 1 pyruvate[c] + 1 CO2[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 2 reactions found over 5 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




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