Difference between revisions of "Tiso gene 8007"

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(Created page with "Category:Gene == Gene Tiso_gene_829 == * left end position: ** 21934 * transcription direction: ** POSITIVE * right end position: ** 27885 * centisome position: ** 76.7916...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_829 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] ==
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* left end position:
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* direction:
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** 21934
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-oxo-octanoyl-[acyl-carrier protein] reductase
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* right end position:
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** polyketide_synthase
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** 27885
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** 3-oxoacyl-(acyl-carrier-protein)
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* centisome position:
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* ec number:
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** 76.79166   
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[5.99.1.3-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[NADPH]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-Hydroxy-octanoyl-ACPs]][c]
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***ec-number
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxyoctanoyl-[acp][c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_624]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_10415]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[ATPASE-RXN]]
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* [[Tiso_gene_500]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[Tiso_gene_136]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-12195]]
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* [[Tiso_gene_13394]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-12196]]
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* [[Tiso_gene_9885]]
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN0-5462]]
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* [[Tiso_gene_10876]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_16579]]
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* [[PWY-7210]]
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** [[pantograph]]-[[synechocystis]]
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* [[PWY-7198]]
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* [[Tiso_gene_135]]
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* [[PWY-6545]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7184]]
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***EC-NUMBER
 +
== Pathways ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
 +
** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=21934}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] reductase}}
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{{#set: right end position=27885}}
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{{#set: common name=polyketide_synthase}}
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{{#set: centisome position=76.79166    }}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: reaction associated=5.99.1.3-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: gene associated=Tiso_gene_624|Tiso_gene_10415|Tiso_gene_13083|Tiso_gene_500|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_9885|Tiso_gene_10876|Tiso_gene_16579|Tiso_gene_135}}
 +
{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:25, 10 January 2018

Reaction RXN-9524

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-octanoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-octanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.








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