Difference between revisions of "RXN0-366"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glutamates Glutamates] == * common name: ** a glutamate * Synonym(s): == Reaction(s) known to...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glutamates Glutamates] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a glutamate
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** ORF
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** adenylate_kinase_domain-containing_protein_1
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** nucleoside_diphosphate_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[3.4.17.11-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[DGDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DGTP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 ATP[c] '''+''' 1 dGDP[c] '''=>''' 1 ADP[c] '''+''' 1 dGTP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16529]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_17271]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18224]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17272]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9290]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_195]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a glutamate}}
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* RHEA:
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{{#set: produced by=3.4.17.11-RXN}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27690 27690]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01857 R01857]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
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{{#set: common name=nucleoside_diphosphate_kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Tiso_gene_16529|Tiso_gene_17271|Tiso_gene_18224|Tiso_gene_17272|Tiso_gene_9290|Tiso_gene_195}}
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{{#set: in pathway=PWY-7222|PWY-7224|PWY-7226}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:25, 10 January 2018

Reaction DGDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • adenylate_kinase_domain-containing_protein_1
    • nucleoside_diphosphate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dGDP[c] => 1 ADP[c] + 1 dGTP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7222, guanosine deoxyribonucleotides de novo biosynthesis II: PWY-7222
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7226, guanosine deoxyribonucleotides de novo biosynthesis I: PWY-7226
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links








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