Difference between revisions of "ATDGM"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17897 RXN-17897] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_root_isozy...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4124 CPD-4124] == * smiles: ** CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(C(C)C(O)CCC(C)1[C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17897 RXN-17897] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4124 CPD-4124] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(C(C)C(O)CCC(C)1[CH]2CCC(C)34))))
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* inchi key:
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** InChIKey=LPZCCMIISIBREI-JXMPMKKESA-N
 
* common name:
 
* common name:
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** ferredoxin--nadp_root_isozyme_chloroplastic
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** 24-ethylidenelophenol
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** ferredoxin--nadp_embryochloroplastic
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* molecular weight:
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* ec number:
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** 426.724   
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** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
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* Synonym(s):
 
* Synonym(s):
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** (Z)-24-ethylidenelophenol
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** citrostadienol
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[NADPH]][c] '''=>''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c]
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* [[2.1.1.143-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 NADPH[c] '''=>''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 NADP+[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17170]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20168]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_19031]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17381]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_20055]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_20054]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=9548595 9548595]
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{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
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* CHEBI:
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{{#set: ec number=EC-1.18.1.2}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=33203 33203]
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{{#set: gene associated=Tiso_gene_17170|Tiso_gene_20168|Tiso_gene_19031|Tiso_gene_17381|Tiso_gene_20055|Tiso_gene_20054}}
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* LIGAND-CPD:
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{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11523 C11523]
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{{#set: reconstruction category=orthology}}
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{{#set: smiles=CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(C(C)C(O)CCC(C)1[CH]2CCC(C)34))))}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=LPZCCMIISIBREI-JXMPMKKESA-N}}
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{{#set: reconstruction source=synechocystis|athaliana}}
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{{#set: common name=24-ethylidenelophenol}}
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{{#set: reconstruction category=annotation}}
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{{#set: molecular weight=426.724    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=(Z)-24-ethylidenelophenol|citrostadienol}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: produced by=2.1.1.143-RXN}}

Revision as of 17:25, 10 January 2018

Metabolite CPD-4124

  • smiles:
    • CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(C(C)C(O)CCC(C)1[CH]2CCC(C)34))))
  • inchi key:
    • InChIKey=LPZCCMIISIBREI-JXMPMKKESA-N
  • common name:
    • 24-ethylidenelophenol
  • molecular weight:
    • 426.724
  • Synonym(s):
    • (Z)-24-ethylidenelophenol
    • citrostadienol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(C(C)C(O)CCC(C)1[CH]2CCC(C)34))))" cannot be used as a page name in this wiki.



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