Difference between revisions of "6.3.2.25-RXN"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Apo-3-methylcrotonoyl-CoA-carbon-dioxide Apo-3-methylcrotonoyl-CoA-carbon-dioxide] == * common...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] == * direction: ** LEFT-TO-RIGHT * com...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** polyketide_synthase |
+ | ** malonyl-_:acp_transacylase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.39 EC-2.3.1.39] | ||
* Synonym(s): | * Synonym(s): | ||
− | == Reaction(s) | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | == | + | ** 1 [[MALONYL-COA]][c] '''+''' 1 [[ACP]][c] '''=>''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[CO-A]][c] |
− | == | + | * With common name(s): |
+ | ** 1 malonyl-CoA[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''=>''' 1 a malonyl-[acp][c] '''+''' 1 coenzyme A[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_19309]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_135]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_18460]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | * [[Tiso_gene_10876]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_136]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_500]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_13394]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[PWY-6799]], fatty acid biosynthesis (plant mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6799 PWY-6799] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * [[orthology]]: | ||
+ | ** [[pantograph]]: | ||
+ | *** [[synechocystis]] | ||
+ | *** [[esiliculosus]] | ||
+ | * [[manual]]: | ||
+ | ** [[primary_network]] | ||
+ | * [[annotation]]: | ||
+ | ** [[pathwaytools]]: | ||
+ | *** [[experimental_annotation]] | ||
+ | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
− | {{#set: common name= | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P72391 P72391] | ||
+ | ** [http://www.uniprot.org/uniprot/P49327 P49327] | ||
+ | ** [http://www.uniprot.org/uniprot/O34825 O34825] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9] | ||
+ | ** [http://www.uniprot.org/uniprot/O24916 O24916] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11] | ||
+ | ** [http://www.uniprot.org/uniprot/P43712 P43712] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1] | ||
+ | ** [http://www.uniprot.org/uniprot/O67041 O67041] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6] | ||
+ | ** [http://www.uniprot.org/uniprot/P63458 P63458] | ||
+ | ** [http://www.uniprot.org/uniprot/O84241 O84241] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5] | ||
+ | ** [http://www.uniprot.org/uniprot/P71019 P71019] | ||
+ | ** [http://www.uniprot.org/uniprot/P07149 P07149] | ||
+ | ** [http://www.uniprot.org/uniprot/P73242 P73242] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07] | ||
+ | ** [http://www.uniprot.org/uniprot/Q54205 Q54205] | ||
+ | ** [http://www.uniprot.org/uniprot/O54437 O54437] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56692 Q56692] | ||
+ | ** [http://www.uniprot.org/uniprot/O13698 O13698] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34] | ||
+ | ** [http://www.uniprot.org/uniprot/O69476 O69476] | ||
+ | ** [http://www.uniprot.org/uniprot/P12276 P12276] | ||
+ | ** [http://www.uniprot.org/uniprot/P12785 P12785] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=polyketide_synthase}} | ||
+ | {{#set: common name=malonyl-_:acp_transacylase}} | ||
+ | {{#set: ec number=EC-2.3.1.86}} | ||
+ | {{#set: ec number=EC-2.3.1.85}} | ||
+ | {{#set: ec number=EC-2.3.1.39}} | ||
+ | {{#set: gene associated=Tiso_gene_19309|Tiso_gene_135|Tiso_gene_18460|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394}} | ||
+ | {{#set: in pathway=PWY-6799|PWY-7388|PWY-4381}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction source=synechocystis|esiliculosus}} | ||
+ | {{#set: reconstruction category=manual}} | ||
+ | {{#set: reconstruction source=primary_network}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} |
Revision as of 17:26, 10 January 2018
Contents
Reaction MALONYL-COA-ACP-TRANSACYL-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- malonyl-_:acp_transacylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 MALONYL-COA[c] + 1 ACP[c] => 1 MALONYL-ACP[c] + 1 CO-A[c]
- With common name(s):
- 1 malonyl-CoA[c] + 1 a holo-[acyl-carrier protein][c] => 1 a malonyl-[acp][c] + 1 coenzyme A[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_19309
- Tiso_gene_135
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_18460
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-synechocystis
- IN-SILICO_ANNOTATION
- Tiso_gene_10876
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_136
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_500
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_13394
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-6799, fatty acid biosynthesis (plant mitochondria): PWY-6799
- 1 reactions found over 4 reactions in the full pathway
- PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
- 9 reactions found over 9 reactions in the full pathway
- PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
External links
- LIGAND-RXN:
- UNIPROT: