Difference between revisions of "RXN1G-138"

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(Created page with "Category:Gene == Gene Tiso_gene_5178 == * left end position: ** 4085 * transcription direction: ** POSITIVE * right end position: ** 4625 * centisome position: ** 29.56931...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxal_kinase...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_5178 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] ==
* left end position:
+
* direction:
** 4085
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** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** pyridoxal_kinase
* right end position:
+
* ec number:
** 4625
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** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
* centisome position:
+
** 29.56931   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[ADP]][c]
***ec-number
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* With common name(s):
== Pathways associated ==
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** 1 ATP[c] '''+''' 1 pyridoxal[c] '''=>''' 1 H+[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_6106]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
 +
== Pathways  ==
 +
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4085}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10224 10224]
{{#set: right end position=4625}}
+
* LIGAND-RXN:
{{#set: centisome position=29.56931    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
 +
** [http://www.uniprot.org/uniprot/P44690 P44690]
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** [http://www.uniprot.org/uniprot/P77150 P77150]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=pyridoxal_kinase}}
 +
{{#set: ec number=EC-2.7.1.35}}
 +
{{#set: gene associated=Tiso_gene_6106}}
 +
{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:27, 10 January 2018

Reaction PYRIDOXKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxal_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 6 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links