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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] == | + | == Gene Tiso_gene_1037 == |
| − | * direction: | + | * left end position: |
| − | ** REVERSIBLE | + | ** 21161 |
| − | * common name: | + | * transcription direction: |
| − | ** ORF | + | ** POSITIVE |
| − | * ec number: | + | * right end position: |
| − | ** [http://enzyme.expasy.org/EC/3.5.2.3 EC-3.5.2.3] | + | ** 26368 |
| | + | * centisome position: |
| | + | ** 79.78058 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[DNA-DIRECTED-RNA-POLYMERASE-RXN]] |
| − | ** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CARBAMYUL-L-ASPARTATE]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***ec-number |
| − | ** 1 (S)-dihydroorotate[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 N-carbamoyl-L-aspartate[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_15379]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]] | + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
| + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
| + | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway | + | |
| − | * [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] | + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[synechocystis]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=21161}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24296 24296]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=26368}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
| + | {{#set: centisome position=79.78058 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P08955 P08955]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P27708 P27708]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q91437 Q91437]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58885 Q58885]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25995 P25995]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P20051 P20051]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P06204 P06204]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05020 P05020]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P31301 P31301]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46538 P46538]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P20054 P20054]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05990 P05990]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q06950 Q06950]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P72934 P72934]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P74438 P74438]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O04904 O04904]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P72170 P72170]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O76138 O76138]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O27199 O27199]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P48795 P48795]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: ec number=EC-3.5.2.3}} | + | |
| − | {{#set: gene associated=Tiso_gene_15379}} | + | |
| − | {{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|synechocystis}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
