Difference between revisions of "Keratan-sulfate-NAcGlc"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15130 RXN-15130] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9025 RXN-9025] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * ec...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15130 RXN-15130] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9025 RXN-9025] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** thymidine_phosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[CYS]][c]
+
** 1 [[CPD0-1027]][c] '''+''' n [[Pi]][c] '''=>''' n [[GLC-1-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cystathionine[c] '''+''' 1 H2O[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c] '''+''' 1 L-cysteine[c]
+
** 1 a debranched α-limit dextrin[c] '''+''' n phosphate[c] '''=>''' n α-D-glucopyranose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3732]]
+
* [[Tiso_gene_1011]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* [[annotation]]:
−
** [[pantograph]]:
+
** [[pathwaytools]]:
−
*** [[esiliculosus]]
+
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01001 R01001]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P21357 P21357]
 
−
** [http://www.uniprot.org/uniprot/P18757 P18757]
 
−
** [http://www.uniprot.org/uniprot/P32929 P32929]
 
−
** [http://www.uniprot.org/uniprot/P31373 P31373]
 
−
** [http://www.uniprot.org/uniprot/Q47847 Q47847]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.4.1.1}}
+
{{#set: common name=thymidine_phosphorylase}}
−
{{#set: gene associated=Tiso_gene_3732}}
+
{{#set: ec number=EC-2.4.1.1}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_1011}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-5941|GLYCOCAT-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:29, 10 January 2018

Reaction RXN-9025

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a debranched α-limit dextrin[c] + n phosphate[c] => n α-D-glucopyranose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5941, glycogen degradation II: PWY-5941
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Keratan-sulfate-NAcGlc&oldid=18003"