Difference between revisions of "CPD-10280"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II D2 protein * e...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6543 == * left end position: ** 5658 * transcription direction: ** POSITIVE * right end position: ** 8908 * centisome position: ** 27.56235...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
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== Gene Tiso_gene_6543 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5658
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* common name:
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* transcription direction:
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** Photosystem II D2 protein
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
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** 8908
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* centisome position:
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** 27.562353   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.4.21.112-RXN]]
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** 1 [[Light]][c] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''=>''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Plastoquinols]][c] '''+''' 4 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 hν[c] '''+''' 4 H+[e] '''+''' 2 H2O[c] '''+''' 2 a plastoquinone[c] '''=>''' 1 oxygen[c] '''+''' 2 a plastoquinol[c] '''+''' 4 H+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5033]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13951]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5658}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8908}}
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{{#set: common name=Photosystem II D2 protein}}
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{{#set: centisome position=27.562353    }}
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{{#set: ec number=EC-1.10.3.9}}
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{{#set: reaction associated=3.4.21.112-RXN}}
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{{#set: gene associated=Tiso_gene_5033|Tiso_gene_13951}}
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{{#set: in pathway=PWY-101}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 17:29, 10 January 2018

Gene Tiso_gene_6543

  • left end position:
    • 5658
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8908
  • centisome position:
    • 27.562353
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-10280&oldid=18016"