Difference between revisions of "CPD0-1422"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec numb...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CPD-730]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-11517]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[Glycerophosphodiesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Alcohols]][c] '''+''' 1 [[GLYCEROL-3P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] '''+''' 1 AMP[c]
+
** 1 a glycerophosphodiester[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 an alcohol[c] '''+''' 1 sn-glycerol 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12275]]
+
* [[Tiso_gene_17232]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_14183]]
+
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* [[Tiso_gene_5334]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWY-6952]], glycerophosphodiester degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952]
−
** '''15''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* [[annotation]]:
−
** [[pantograph]]:
+
** [[pathwaytools]]:
−
*** [[esiliculosus]]
+
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07887 R07887]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q99387 Q99387]
 +
** [http://www.uniprot.org/uniprot/P10908 P10908]
 +
** [http://www.uniprot.org/uniprot/Q06282 Q06282]
 +
** [http://www.uniprot.org/uniprot/Q9V208 Q9V208]
 +
** [http://www.uniprot.org/uniprot/P09394 P09394]
 +
** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.2.1}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
+
{{#set: ec number=EC-3.1.4.46}}
−
{{#set: in pathway=PWY-735}}
+
{{#set: gene associated=Tiso_gene_17232|Tiso_gene_5334}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-6952}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:29, 10 January 2018

Reaction GLYCPDIESTER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6952, glycerophosphodiester degradation: PWY-6952
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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