Difference between revisions of "Tiso gene 8186"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11246 RXN-11246] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
(Created page with "Category:Gene == Gene Tiso_gene_3359 == * left end position: ** 15139 * transcription direction: ** NEGATIVE * right end position: ** 16461 * centisome position: ** 89.484...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11246 RXN-11246] ==
+
== Gene Tiso_gene_3359 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 15139
−
* common name:
+
* transcription direction:
−
** thiolase
+
** NEGATIVE
−
** acetyl-_c-acetyltransferase
+
* right end position:
−
** 3-ketoacyl-_thiolase
+
** 16461
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** 89.48457   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-10600]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-201]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 coenzyme A[c] '''+''' 1 4-hydroxybenzoyl-acetyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 4-hydroxybenzoyl-CoA[c]
+
** [[pantograph]]-[[athaliana]]
−
 
+
** [[pantograph]]-[[esiliculosus]]
−
== Genes associated with this reaction  ==
+
** [[pantograph]]-[[creinhardtii]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_3855]]
+
* [[PWY-4041]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=15139}}
−
{{#set: common name=thiolase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: right end position=16461}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: centisome position=89.48457    }}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: reaction associated=5-OXOPROLINASE-ATP-HYDROLYSING-RXN}}
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_10116}}
+
{{#set: pathway associated=PWY-4041}}
−
{{#set: in pathway=PWY-6435}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:31, 10 January 2018

Gene Tiso_gene_3359

  • left end position:
    • 15139
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 16461
  • centisome position:
    • 89.48457
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8186&oldid=18187"