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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == | + | == Gene Tiso_gene_5195 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 1563 |
| − | * common name: | + | * transcription direction: |
| − | ** ferredoxin-dependent_glutamate_synthase | + | ** POSITIVE |
| − | * ec number: | + | * right end position: |
| − | ** [http://enzyme.expasy.org/EC/1.4.7.1 EC-1.4.7.1] | + | ** 4938 |
| | + | * centisome position: |
| | + | ** 11.330192 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[UDPNACETYLMURAMATEDEHYDROG-RXN]] |
| − | ** 1 [[GLN]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[GLT]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***ec-number |
| − | ** 1 L-glutamine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 2 L-glutamate[c]
| + | == Pathways associated == |
| − | | + | * [[PWY-6386]] |
| − | == Genes associated with this reaction ==
| + | * [[PWY-6387]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_1773]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_2581]]
| + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_1154]]
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH | + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964] | + | |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-4341]], L-glutamate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4341 PWY-4341] | + | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| + | |
| − | * [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: left end position=1563}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * UNIPROT:
| + | {{#set: right end position=4938}} |
| − | ** [http://www.uniprot.org/uniprot/P23225 P23225]
| + | {{#set: centisome position=11.330192 }} |
| − | ** [http://www.uniprot.org/uniprot/O67512 O67512]
| + | {{#set: reaction associated=UDPNACETYLMURAMATEDEHYDROG-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P96218 P96218]
| + | {{#set: pathway associated=PWY-6386|PWY-6387}} |
| − | ** [http://www.uniprot.org/uniprot/Q06434 Q06434]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43081 Q43081]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P55037 P55037]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43155 Q43155]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P51375 P51375]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P55038 P55038]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q08258 Q08258]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O49154 O49154]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O19906 O19906]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=ferredoxin-dependent_glutamate_synthase}} | + | |
| − | {{#set: ec number=EC-1.4.7.1}} | + | |
| − | {{#set: gene associated=Tiso_gene_1773|Tiso_gene_2581|Tiso_gene_1154}} | + | |
| − | {{#set: in pathway=PWY-6964|PWY-4341|PWY-6549}} | + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
