Difference between revisions of "Cis-delta15-gheddoyl-ACPs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5047 == * left end position: ** 11687 * transcription direction: ** POSITIVE * right end position: ** 13971 * centisome position: ** 83.639...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] ==
+
== Gene Tiso_gene_5047 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 11687
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/5.4.99.8 EC-5.4.99.8]
+
** POSITIVE
 +
* right end position:
 +
** 13971
 +
* centisome position:
 +
** 83.63988   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[HISTCYCLOHYD-RXN]]
−
** 1 [[EPOXYSQUALENE]][c] '''=>''' 1 [[CYCLOARTENOL]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] '''=>''' 1 cycloartenol[c]
+
== Pathways associated ==
−
 
+
* [[HISTSYN-PWY]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_14526]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
* [[PWY-7154]], ergosterol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7154 PWY-7154]
+
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
+
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6115]], avenacin biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6115 PWY-6115]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6109]], mangrove triterpenoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6109 PWY-6109]
+
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
+
−
** '''10''' reactions found over '''36''' reactions in the full pathway
+
−
* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=11687}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21311 21311]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=13971}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03200 R03200]
+
{{#set: centisome position=83.63988    }}
−
* UNIPROT:
+
{{#set: reaction associated=HISTCYCLOHYD-RXN}}
−
** [http://www.uniprot.org/uniprot/O23909 O23909]
+
{{#set: pathway associated=HISTSYN-PWY}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-5.4.99.8}}
+
−
{{#set: gene associated=Tiso_gene_14526}}
+
−
{{#set: in pathway=PWY-7154|PWY-7155|PWY-6115|PWY-6109|PWY-2541|PWY-6098}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
+

Revision as of 18:31, 10 January 2018

Gene Tiso_gene_5047

  • left end position:
    • 11687
  • transcription direction:
    • POSITIVE
  • right end position:
    • 13971
  • centisome position:
    • 83.63988
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Cis-delta15-gheddoyl-ACPs&oldid=18247"