Difference between revisions of "Cis-cis-D7-19-3-oxo-C38-2-ACPs"

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(Created page with "Category:Gene == Gene Tiso_gene_4816 == * left end position: ** 14613 * transcription direction: ** NEGATIVE * right end position: ** 17531 * centisome position: ** 82.934...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.16-RXN 3.1.3.16-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formin_domain_contain...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_4816 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.16-RXN 3.1.3.16-RXN] ==
−
* left end position:
+
* direction:
−
** 14613
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** formin_domain_containing_protein
−
* right end position:
+
** formin-like_protein_14
−
** 17531
+
** protein_phosphatase_1
−
* centisome position:
+
** ORF
−
** 82.934166   
+
** serine_threonine-protein_phosphatase
 +
** serine_threonine_protein_phosphatase_2a
 +
** serine_threonine-phosphatase
 +
** protein_phosphatase
 +
** dual_specificity_phosphatase
 +
** protein_phosphatase_2c
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.16 EC-3.1.3.16]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ADENYL-KIN-RXN]]
+
* With identifiers:
 +
** 1 [[Protein-Ser-or-Thr-phosphate]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Protein-L-serine-or-L-threonine]][c]
 +
* With common name(s):
 +
** 1 a [protein] (L-serine/L-threonine) phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 a [protein]-(L-serine/L-threonine)[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_7036]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_12379]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1395]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_453]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_7035]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_13371]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_18472]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_452]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_16525]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_19603]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_11870]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_5305]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15559]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3751]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_18502]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12989]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15788]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_20309]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4137]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4164]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_2034]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_10912]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_16524]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_2578]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[GLUC1PURIDYLTRANS-RXN]]
+
* [[Tiso_gene_1840]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15176]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[PGCM]]
+
* [[Tiso_gene_17314]]
−
** [[pantograph]]-[[creinhardtii]]
+
** EXPERIMENTAL_ANNOTATION
−
* [[PGMTh]]
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[creinhardtii]]
+
* [[Tiso_gene_2190]]
−
* [[PHOSMANMUT-RXN]]
+
** IN-SILICO_ANNOTATION
−
** [[pantograph]]-[[synechocystis]]
+
***EC-NUMBER
−
* [[PHOSPHOGLUCMUT-RXN]]
+
== Pathways ==
−
** in-silico_annotation
+
== Reconstruction information  ==
−
***ec-number
+
* [[orthology]]:
−
** experimental_annotation
+
** [[pantograph]]:
−
***ec-number
+
*** [[esiliculosus]]
−
* [[RXN-14456]]
+
* [[annotation]]:
−
** [[pantograph]]-[[creinhardtii]]
+
** [[pathwaytools]]:
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[experimental_annotation]]
−
* [[RXN-16997]]
+
*** [[in-silico_annotation]]
−
** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
+
−
* [[RXN-16998]]
+
−
** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
+
−
== Pathways associated ==
+
−
* [[PWY-3801]]
+
−
* [[PWY-7817]]
+
−
* [[PWY-5659]]
+
−
* [[PWY-2723]]
+
−
* [[GLYCOGENSYNTH-PWY]]
+
−
* [[PWY-5384]]
+
−
* [[PWY-7343]]
+
−
* [[PWY-7456]]
+
−
* [[PWY-6527]]
+
−
* [[PWY-5661]]
+
−
* [[PWY-622]]
+
−
* [[PWY-6317]]
+
−
* [[PWY66-422]]
+
−
* [[PWY-5941]]
+
−
* [[PWY-5940]]
+
−
* [[PWY-7238]]
+
−
* [[PWY-882]]
+
−
* [[GLYCOCAT-PWY]]
+
−
* [[PWY-7219]]
+
−
* [[PWY-7586]]
+
−
* [[PWY-6731]]
+
−
* [[GLUCOSE1PMETAB-PWY]]
+
−
* [[PWY-6737]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=14613}}
+
* UNIPROT:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.uniprot.org/uniprot/P67776 P67776]
−
{{#set: right end position=17531}}
+
** [http://www.uniprot.org/uniprot/P67774 P67774]
−
{{#set: centisome position=82.934166    }}
+
** [http://www.uniprot.org/uniprot/P63328 P63328]
−
{{#set: reaction associated=ADENYL-KIN-RXN|GLUC1PURIDYLTRANS-RXN|PGCM|PGMTh|PHOSMANMUT-RXN|PHOSPHOGLUCMUT-RXN|RXN-14456|RXN-16997|RXN-16998}}
+
** [http://www.uniprot.org/uniprot/P20650 P20650]
−
{{#set: pathway associated=PWY-3801|PWY-7817|PWY-5659|PWY-2723|GLYCOGENSYNTH-PWY|PWY-5384|PWY-7343|PWY-7456|PWY-6527|PWY-5661|PWY-622|PWY-6317|PWY66-422|PWY-5941|PWY-5940|PWY-7238|PWY-882|GLYCOCAT-PWY|PWY-7219|PWY-7586|PWY-6731|GLUCOSE1PMETAB-PWY|PWY-6737}}
+
** [http://www.uniprot.org/uniprot/P20654 P20654]
 +
** [http://www.uniprot.org/uniprot/P13681 P13681]
 +
** [http://www.uniprot.org/uniprot/P63329 P63329]
 +
** [http://www.uniprot.org/uniprot/P20651 P20651]
 +
** [http://www.uniprot.org/uniprot/Q7M2R6 Q7M2R6]
 +
** [http://www.uniprot.org/uniprot/P23635 P23635]
 +
** [http://www.uniprot.org/uniprot/P16298 P16298]
 +
** [http://www.uniprot.org/uniprot/Q04071 Q04071]
 +
** [http://www.uniprot.org/uniprot/P48455 P48455]
 +
** [http://www.uniprot.org/uniprot/Q7M2L6 Q7M2L6]
 +
** [http://www.uniprot.org/uniprot/Q00756 Q00756]
 +
** [http://www.uniprot.org/uniprot/Q05681 Q05681]
 +
** [http://www.uniprot.org/uniprot/P36876 P36876]
 +
** [http://www.uniprot.org/uniprot/P40421 P40421]
 +
** [http://www.uniprot.org/uniprot/Q27787 Q27787]
 +
** [http://www.uniprot.org/uniprot/P36872 P36872]
 +
** [http://www.uniprot.org/uniprot/Q07161 Q07161]
 +
** [http://www.uniprot.org/uniprot/Q06190 Q06190]
 +
** [http://www.uniprot.org/uniprot/P36982 P36982]
 +
** [http://www.uniprot.org/uniprot/P49444 P49444]
 +
** [http://www.uniprot.org/uniprot/P50410 P50410]
 +
** [http://www.uniprot.org/uniprot/P40371 P40371]
 +
** [http://www.uniprot.org/uniprot/P48452 P48452]
 +
** [http://www.uniprot.org/uniprot/P23880 P23880]
 +
** [http://www.uniprot.org/uniprot/P23636 P23636]
 +
** [http://www.uniprot.org/uniprot/P48456 P48456]
 +
** [http://www.uniprot.org/uniprot/Q27786 Q27786]
 +
** [http://www.uniprot.org/uniprot/P63087 P63087]
 +
** [http://www.uniprot.org/uniprot/Q04104 Q04104]
 +
** [http://www.uniprot.org/uniprot/P62141 P62141]
 +
** [http://www.uniprot.org/uniprot/P54613 P54613]
 +
** [http://www.uniprot.org/uniprot/Q04101 Q04101]
 +
** [http://www.uniprot.org/uniprot/O28453 O28453]
 +
** [http://www.uniprot.org/uniprot/Q04102 Q04102]
 +
** [http://www.uniprot.org/uniprot/Q04103 Q04103]
 +
** [http://www.uniprot.org/uniprot/Q16821 Q16821]
 +
** [http://www.uniprot.org/uniprot/P36993 P36993]
 +
** [http://www.uniprot.org/uniprot/Q16474 Q16474]
 +
** [http://www.uniprot.org/uniprot/P62142 P62142]
 +
** [http://www.uniprot.org/uniprot/P63088 P63088]
 +
** [http://www.uniprot.org/uniprot/P48454 P48454]
 +
** [http://www.uniprot.org/uniprot/P35815 P35815]
 +
** [http://www.uniprot.org/uniprot/Q92140 Q92140]
 +
** [http://www.uniprot.org/uniprot/P87345 P87345]
 +
** [http://www.uniprot.org/uniprot/Q9P982 Q9P982]
 +
** [http://www.uniprot.org/uniprot/P48453 P48453]
 +
** [http://www.uniprot.org/uniprot/P62138 P62138]
 +
** [http://www.uniprot.org/uniprot/P20604 P20604]
 +
** [http://www.uniprot.org/uniprot/P26570 P26570]
 +
** [http://www.uniprot.org/uniprot/P23594 P23594]
 +
** [http://www.uniprot.org/uniprot/P23595 P23595]
 +
** [http://www.uniprot.org/uniprot/P32345 P32345]
 +
** [http://www.uniprot.org/uniprot/P12982 P12982]
 +
** [http://www.uniprot.org/uniprot/P11612 P11612]
 +
** [http://www.uniprot.org/uniprot/P67777 P67777]
 +
** [http://www.uniprot.org/uniprot/P67775 P67775]
 +
** [http://www.uniprot.org/uniprot/P62714 P62714]
 +
** [http://www.uniprot.org/uniprot/P62139 P62139]
 +
** [http://www.uniprot.org/uniprot/P11611 P11611]
 +
** [http://www.uniprot.org/uniprot/P11084 P11084]
 +
** [http://www.uniprot.org/uniprot/P63331 P63331]
 +
** [http://www.uniprot.org/uniprot/P62716 P62716]
 +
** [http://www.uniprot.org/uniprot/P23734 P23734]
 +
** [http://www.uniprot.org/uniprot/P23696 P23696]
 +
** [http://www.uniprot.org/uniprot/P23777 P23777]
 +
** [http://www.uniprot.org/uniprot/P48461 P48461]
 +
** [http://www.uniprot.org/uniprot/P48462 P48462]
 +
** [http://www.uniprot.org/uniprot/P62143 P62143]
 +
** [http://www.uniprot.org/uniprot/P23287 P23287]
 +
** [http://www.uniprot.org/uniprot/Q8AVH9 Q8AVH9]
 +
** [http://www.uniprot.org/uniprot/P35814 P35814]
 +
** [http://www.uniprot.org/uniprot/P35813 P35813]
 +
** [http://www.uniprot.org/uniprot/P48482 P48482]
 +
** [http://www.uniprot.org/uniprot/P48485 P48485]
 +
** [http://www.uniprot.org/uniprot/P48487 P48487]
 +
** [http://www.uniprot.org/uniprot/Q9PSQ6 Q9PSQ6]
 +
** [http://www.uniprot.org/uniprot/Q95097 Q95097]
 +
** [http://www.uniprot.org/uniprot/P22198 P22198]
 +
** [http://www.uniprot.org/uniprot/Q05547 Q05547]
 +
** [http://www.uniprot.org/uniprot/P48483 P48483]
 +
** [http://www.uniprot.org/uniprot/P48484 P48484]
 +
** [http://www.uniprot.org/uniprot/Q07099 Q07099]
 +
** [http://www.uniprot.org/uniprot/Q07098 Q07098]
 +
** [http://www.uniprot.org/uniprot/Q07100 Q07100]
 +
** [http://www.uniprot.org/uniprot/P32598 P32598]
 +
** [http://www.uniprot.org/uniprot/P36877 P36877]
 +
** [http://www.uniprot.org/uniprot/Q08209 Q08209]
 +
** [http://www.uniprot.org/uniprot/Q06009 Q06009]
 +
** [http://www.uniprot.org/uniprot/P33329 P33329]
 +
** [http://www.uniprot.org/uniprot/P36873 P36873]
 +
** [http://www.uniprot.org/uniprot/P31383 P31383]
 +
** [http://www.uniprot.org/uniprot/P48579 P48579]
 +
** [http://www.uniprot.org/uniprot/P32945 P32945]
 +
** [http://www.uniprot.org/uniprot/Q27884 Q27884]
 +
** [http://www.uniprot.org/uniprot/P34221 P34221]
 +
** [http://www.uniprot.org/uniprot/Q7M3E4 Q7M3E4]
 +
** [http://www.uniprot.org/uniprot/P62140 P62140]
 +
** [http://www.uniprot.org/uniprot/Q27889 Q27889]
 +
** [http://www.uniprot.org/uniprot/P35182 P35182]
 +
** [http://www.uniprot.org/uniprot/P48529 P48529]
 +
** [http://www.uniprot.org/uniprot/P48528 P48528]
 +
** [http://www.uniprot.org/uniprot/Q21513 Q21513]
 +
** [http://www.uniprot.org/uniprot/P48488 P48488]
 +
** [http://www.uniprot.org/uniprot/P48457 P48457]
 +
** [http://www.uniprot.org/uniprot/P38089 P38089]
 +
** [http://www.uniprot.org/uniprot/P14747 P14747]
 +
** [http://www.uniprot.org/uniprot/P48490 P48490]
 +
** [http://www.uniprot.org/uniprot/P53041 P53041]
 +
** [http://www.uniprot.org/uniprot/P53043 P53043]
 +
** [http://www.uniprot.org/uniprot/P48578 P48578]
 +
** [http://www.uniprot.org/uniprot/P49598 P49598]
 +
** [http://www.uniprot.org/uniprot/P48580 P48580]
 +
** [http://www.uniprot.org/uniprot/P32838 P32838]
 +
** [http://www.uniprot.org/uniprot/Q63759 Q63759]
 +
** [http://www.uniprot.org/uniprot/Q14738 Q14738]
 +
** [http://www.uniprot.org/uniprot/Q27560 Q27560]
 +
** [http://www.uniprot.org/uniprot/Q38845 Q38845]
 +
** [http://www.uniprot.org/uniprot/Q8L7U5 Q8L7U5]
 +
** [http://www.uniprot.org/uniprot/P48489 P48489]
 +
** [http://www.uniprot.org/uniprot/Q42981 Q42981]
 +
** [http://www.uniprot.org/uniprot/O04856 O04856]
 +
** [http://www.uniprot.org/uniprot/O04857 O04857]
 +
** [http://www.uniprot.org/uniprot/O04858 O04858]
 +
** [http://www.uniprot.org/uniprot/O04859 O04859]
 +
** [http://www.uniprot.org/uniprot/O04860 O04860]
 +
** [http://www.uniprot.org/uniprot/Q40556 Q40556]
 +
** [http://www.uniprot.org/uniprot/P49597 P49597]
 +
** [http://www.uniprot.org/uniprot/O65844 O65844]
 +
** [http://www.uniprot.org/uniprot/O65845 O65845]
 +
** [http://www.uniprot.org/uniprot/O65846 O65846]
 +
** [http://www.uniprot.org/uniprot/O65847 O65847]
 +
** [http://www.uniprot.org/uniprot/O81955 O81955]
 +
** [http://www.uniprot.org/uniprot/O81956 O81956]
 +
** [http://www.uniprot.org/uniprot/Q50188 Q50188]
 +
** [http://www.uniprot.org/uniprot/P48486 P48486]
 +
** [http://www.uniprot.org/uniprot/Q42912 Q42912]
 +
** [http://www.uniprot.org/uniprot/O18148 O18148]
 +
** [http://www.uniprot.org/uniprot/O14189 O14189]
 +
** [http://www.uniprot.org/uniprot/Q10298 Q10298]
 +
** [http://www.uniprot.org/uniprot/O01921 O01921]
 +
** [http://www.uniprot.org/uniprot/Q94374 Q94374]
 +
** [http://www.uniprot.org/uniprot/Q94372 Q94372]
 +
** [http://www.uniprot.org/uniprot/Q94371 Q94371]
 +
** [http://www.uniprot.org/uniprot/Q94370 Q94370]
 +
** [http://www.uniprot.org/uniprot/Q12705 Q12705]
 +
** [http://www.uniprot.org/uniprot/O49346 O49346]
 +
** [http://www.uniprot.org/uniprot/O82469 O82469]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=formin_domain_containing_protein}}
 +
{{#set: common name=formin-like_protein_14}}
 +
{{#set: common name=protein_phosphatase_1}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=serine_threonine-protein_phosphatase}}
 +
{{#set: common name=serine_threonine_protein_phosphatase_2a}}
 +
{{#set: common name=serine_threonine-phosphatase}}
 +
{{#set: common name=protein_phosphatase}}
 +
{{#set: common name=dual_specificity_phosphatase}}
 +
{{#set: common name=protein_phosphatase_2c}}
 +
{{#set: ec number=EC-3.1.3.16}}
 +
{{#set: gene associated=Tiso_gene_7036|Tiso_gene_12379|Tiso_gene_1395|Tiso_gene_453|Tiso_gene_7035|Tiso_gene_13371|Tiso_gene_18472|Tiso_gene_452|Tiso_gene_16525|Tiso_gene_19603|Tiso_gene_11870|Tiso_gene_5305|Tiso_gene_15559|Tiso_gene_3751|Tiso_gene_18502|Tiso_gene_12989|Tiso_gene_15788|Tiso_gene_20309|Tiso_gene_4137|Tiso_gene_4164|Tiso_gene_2034|Tiso_gene_10912|Tiso_gene_16524|Tiso_gene_2578|Tiso_gene_1840|Tiso_gene_15176|Tiso_gene_17314|Tiso_gene_2190}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:32, 10 January 2018

Reaction 3.1.3.16-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formin_domain_containing_protein
    • formin-like_protein_14
    • protein_phosphatase_1
    • ORF
    • serine_threonine-protein_phosphatase
    • serine_threonine_protein_phosphatase_2a
    • serine_threonine-phosphatase
    • protein_phosphatase
    • dual_specificity_phosphatase
    • protein_phosphatase_2c
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links











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