Difference between revisions of "Tiso gene 2693"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14277 RXN-14277] == * direction: ** REVERSIBLE * common name: ** hexanoyl-CoA C-acyltransferase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14277 RXN-14277] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** hexanoyl-CoA C-acyltransferase
+
−
** thiolase
+
−
** acetyl-_c-acetyltransferase
+
−
** 3-ketoacyl-_thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/2.7.1.91 EC-2.7.1.91]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HEXANOYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD0-2106]][c]
+
** 1 [[CPD-13612]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CPD-649]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 hexanoyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 3-oxooctanoyl-CoA[c]
+
** 1 D-erythro-sphinganine[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 sphinganine 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17451]]
+
* [[Tiso_gene_14560]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
* [[Tiso_gene_1163]]
−
** EXPERIMENTAL_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16181]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[athaliana]]
+
*** [[creinhardtii]]
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31205 31205]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15465 15465]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04747 R04747]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02976 R02976]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hexanoyl-CoA C-acyltransferase}}
+
{{#set: ec number=EC-2.7.1.91}}
−
{{#set: common name=thiolase}}
+
{{#set: gene associated=Tiso_gene_14560|Tiso_gene_1163}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: in pathway=PWY-5129|PWY-7119}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
−
{{#set: ec number=EC-2.3.1.16}}
+
−
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_16181|Tiso_gene_10116|Tiso_gene_3855|Tiso_gene_15327}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:33, 10 January 2018

Reaction SPHINGANINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-erythro-sphinganine[c] + 1 ATP[c] => 1 H+[c] + 1 ADP[c] + 1 sphinganine 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5129, sphingolipid biosynthesis (plants): PWY-5129
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




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