Difference between revisions of "ATAMm"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDC orDC] == * direction: ** LEFT-TO-RIGHT * common name: ** ornithine decarboxylase * Synonym(s):...")
 
(Created page with "Category:Gene == Gene Tiso_gene_15991 == * left end position: ** 622 * transcription direction: ** NEGATIVE * right end position: ** 2366 * centisome position: ** 13.34477...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDC orDC] ==
+
== Gene Tiso_gene_15991 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 622
−
* common name:
+
* transcription direction:
−
** ornithine decarboxylase
+
** NEGATIVE
 +
* right end position:
 +
** 2366
 +
* centisome position:
 +
** 13.344775   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[2.3.1.180-RXN]]
−
** 1.0 [[PROTON]][c] '''+''' 1.0 [[L-ORNITHINE]][c] '''=>''' 1.0 [[PUTRESCINE]][c] '''+''' 1.0 [[CARBON-DIOXIDE]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1.0 H+[c] '''+''' 1.0 L-ornithine[c] '''=>''' 1.0 putrescine[c] '''+''' 1.0 CO2[c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
* [[2.3.1.41-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_10737]]
+
* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
−
** [[pantograph]]-[[creinhardtii]]
+
** [[pantograph]]-[[athaliana]]
−
== Pathways ==
+
** [[pantograph]]-[[athaliana]]
−
== Reconstruction information  ==
+
** [[pantograph]]-[[synechocystis]]
−
* [[orthology]]:
+
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]:
+
* [[3-OXOACYL-ACP-SYNTH-RXN]]
−
*** [[creinhardtii]]
+
** [[pantograph]]-[[esiliculosus]]
 +
* [[ACP-S-ACETYLTRANSFER-RXN]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[RXN-10059]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-10654]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-10658]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-11474]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-11479]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9516]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9523]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9527]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9531]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9535]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9539]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9632]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9648]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9650]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9651]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9652]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9653]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-9654]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-1003]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-132]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-138]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-218]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-236]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-26]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-306]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-324]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-368]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-445]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-460]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-499]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN1G-840]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN3O-1803]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways associated ==
 +
* [[PWY-6113]]
 +
* [[FASYN-ELONG-PWY]]
 +
* [[PWY-6519]]
 +
* [[PWY-7388]]
 +
* [[PWY-5971]]
 +
* [[PWY-6282]]
 +
* [[PWY-5965]]
 +
* [[PWY-5989]]
 +
* [[PWY-5966]]
 +
* [[PWYG-321]]
 +
* [[FASYN-INITIAL-PWY]]
 +
* [[PWY-5994]]
 +
* [[PWY3O-355]]
 +
* [[PWY-4381]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=622}}
−
{{#set: common name=ornithine decarboxylase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: gene associated=Tiso_gene_10737}}
+
{{#set: right end position=2366}}
−
{{#set: in pathway=}}
+
{{#set: centisome position=13.344775    }}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reaction associated=2.3.1.180-RXN|2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|ACP-S-ACETYLTRANSFER-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN1G-1003|RXN1G-132|RXN1G-138|RXN1G-218|RXN1G-236|RXN1G-26|RXN1G-306|RXN1G-324|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN1G-840|RXN3O-1803}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-5994|PWY3O-355|PWY-4381}}
−
{{#set: reconstruction source=creinhardtii}}
+

Revision as of 18:35, 10 January 2018

Gene Tiso_gene_15991

  • left end position:
    • 622
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2366
  • centisome position:
    • 13.344775
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ATAMm&oldid=18512"