Difference between revisions of "R-3-hydroxymyristoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16402 RXN-16402] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] == * direction: ** REVERSIBLE * common name: ** D-sorbitol 2-dehydrogenase ** po...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16402 RXN-16402] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
 +
** D-sorbitol 2-dehydrogenase
 
** polyketide_synthase
 
** polyketide_synthase
−
** long_chain_acyl-_synthetase
+
** l-iditol_2-dehydrogenase
−
** ORF
+
−
** acyl-_synthetase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[18-HYDROXYOLEATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17370]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[SORBITOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15382]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 18-hydroxyoleate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 18-hydroxyoleoyl-CoA[c] '''+''' 1 AMP[c]
+
** 1 D-sorbitol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 keto-D-fructose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4191]]
+
* [[Tiso_gene_18533]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_15088]]
−
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_13394]]
+
* [[Tiso_gene_6562]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_9394]]
+
* [[Tiso_gene_6563]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_5425]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_7855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_348]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_10876]]
+
* [[Tiso_gene_5424]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
+
* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33031 33031]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00875 R00875]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=D-sorbitol 2-dehydrogenase}}
 
{{#set: common name=polyketide_synthase}}
 
{{#set: common name=polyketide_synthase}}
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: common name=l-iditol_2-dehydrogenase}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.1.1.14}}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: gene associated=Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_6562|Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_5424}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: in pathway=PWY-4101}}
−
{{#set: gene associated=Tiso_gene_4191|Tiso_gene_13394|Tiso_gene_9394|Tiso_gene_7855|Tiso_gene_500|Tiso_gene_136|Tiso_gene_348|Tiso_gene_135|Tiso_gene_10876}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY-6733}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:36, 10 January 2018

Reaction RXN-7644

  • direction:
    • REVERSIBLE
  • common name:
    • D-sorbitol 2-dehydrogenase
    • polyketide_synthase
    • l-iditol_2-dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-sorbitol[c] + 1 NAD+[c] <=> 1 NADH[c] + 1 H+[c] + 1 keto-D-fructose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4101, D-sorbitol degradation I: PWY-4101
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links







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