Difference between revisions of "Tiso gene 7789"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-546 RXN66-546] == * direction: ** LEFT-TO-RIGHT * common name: ** pyrroline-5-carboxylate_red...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18328 == * left end position: ** 487 * transcription direction: ** POSITIVE * right end position: ** 3032 * centisome position: ** 15.76562...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-546 RXN66-546] ==
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== Gene Tiso_gene_18328 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 487
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* common name:
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* transcription direction:
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** pyrroline-5-carboxylate_reductase
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** POSITIVE
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** ORF
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* right end position:
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** ankyrin_repeat-containing_protein
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** 3032
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
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** 15.765620   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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** 2 [[PROTON]][c] '''+''' 1 [[PYRROLINE-HYDROXY-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[4-HYDROXY-L-PROLINE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 2 H+[c] '''+''' 1 (3R,5S)-1-pyrroline-3-hydroxy-5-carboxylate[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 trans-4-hydroxy-L-proline[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HPPD]]
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* [[Tiso_gene_19254]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[RXN-10815]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_20218]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8625]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-1581]]
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***EC-NUMBER
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* [[PWY-7432]]
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** EXPERIMENTAL_ANNOTATION
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* [[TYRFUMCAT-PWY]]
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***EC-NUMBER
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* [[PWY-1422]]
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* [[Tiso_gene_17059]]
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* [[PWY-6318]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=487}}
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{{#set: common name=pyrroline-5-carboxylate_reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: right end position=3032}}
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{{#set: common name=ankyrin_repeat-containing_protein}}
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{{#set: centisome position=15.765620    }}
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{{#set: ec number=EC-1.5.1.2}}
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{{#set: reaction associated=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN|HPPD|RXN-10815}}
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{{#set: gene associated=Tiso_gene_19254|Tiso_gene_20218|Tiso_gene_8625|Tiso_gene_17059}}
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{{#set: pathway associated=PWY-1581|PWY-7432|TYRFUMCAT-PWY|PWY-1422|PWY-6318}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:39, 10 January 2018

Gene Tiso_gene_18328

  • left end position:
    • 487
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3032
  • centisome position:
    • 15.765620
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7789&oldid=18839"