Difference between revisions of "CH3-MALONATE-S-ALD"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10857 RXN-10857] == * direction: ** REVERSIBLE * common name: ** dihydroneopterin_aldolase * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYROXINE-DEIODINASE-RXN THYROXINE-DEIODINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10857 RXN-10857] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYROXINE-DEIODINASE-RXN THYROXINE-DEIODINASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dihydroneopterin_aldolase
+
** type_i_iodothyronine_deiodinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.2.25 EC-4.1.2.25]
+
** [http://enzyme.expasy.org/EC/1.21.99.4 EC-1.21.99.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11770]][c] '''<=>''' 1 [[GLYCOLALDEHYDE]][c] '''+''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c]
+
** 1 [[Donor-H2]][c] '''+''' 1 [[L-THYROXINE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LIOTHYRONINE]][c] '''+''' 1 [[CPD-387]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 7,8-dihydromonapterin[c] '''<=>''' 1 glycolaldehyde[c] '''+''' 1 6-(hydroxymethyl)-7,8-dihydropterin[c]
+
** 1 a reduced electron acceptor[c] '''+''' 1 L-thyroxine[c] '''=>''' 1 an oxidized electron acceptor[c] '''+''' 1 H+[c] '''+''' 1 3,5,3'-triiodo-L-thyronine[c] '''+''' 1 iodide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2576]]
+
* [[Tiso_gene_20481]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2577]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6261]], thyroid hormone metabolism II (via conjugation and/or degradation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6261 PWY-6261]
 +
** '''11''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-6260]], thyroid hormone metabolism I (via deiodination): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6260 PWY-6260]
 +
** '''3''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[annotation]]:
 
* [[annotation]]:
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*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=dihydroneopterin_aldolase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19745 19745]
−
{{#set: ec number=EC-4.1.2.25}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_2576|Tiso_gene_2577}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03734 R03734]
−
{{#set: in pathway=}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21195 P21195]
 +
** [http://www.uniprot.org/uniprot/P49897 P49897]
 +
** [http://www.uniprot.org/uniprot/P49898 P49898]
 +
** [http://www.uniprot.org/uniprot/P05307 P05307]
 +
** [http://www.uniprot.org/uniprot/P09102 P09102]
 +
** [http://www.uniprot.org/uniprot/P07237 P07237]
 +
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
 +
** [http://www.uniprot.org/uniprot/P04785 P04785]
 +
** [http://www.uniprot.org/uniprot/P24389 P24389]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=type_i_iodothyronine_deiodinase}}
 +
{{#set: ec number=EC-1.21.99.4}}
 +
{{#set: gene associated=Tiso_gene_20481}}
 +
{{#set: in pathway=PWY-6261|PWY-6260}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:39, 10 January 2018

Reaction THYROXINE-DEIODINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • type_i_iodothyronine_deiodinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a reduced electron acceptor[c] + 1 L-thyroxine[c] => 1 an oxidized electron acceptor[c] + 1 H+[c] + 1 3,5,3'-triiodo-L-thyronine[c] + 1 iodide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6261, thyroid hormone metabolism II (via conjugation and/or degradation): PWY-6261
    • 11 reactions found over 15 reactions in the full pathway
  • PWY-6260, thyroid hormone metabolism I (via deiodination): PWY-6260
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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