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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-477 RXN66-477] == | + | == Gene Tiso_gene_3006 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** straight chain fatty acyl-CoA ligase
| + | |
| − | ** polyketide_synthase
| + | |
| − | ** long_chain_acyl-_synthetase
| + | |
| − | ** acyl-_synthetase
| + | |
| − | ** ORF
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[CATAL-RXN]] |
| − | ** 1 [[Odd-Straight-Chain-234-Sat-FA]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Odd-Saturated-Fatty-Acyl-CoA]][c]
| + | ** [[pantograph]]-[[synechocystis]] |
| − | * With common name(s):
| + | == Pathways associated == |
| − | ** 1 an odd numbered straight chain 2,3,4-saturated fatty acid[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an odd numbered straight chain 2,3,4-saturated fatty acyl CoA[c]
| + | * [[PWY-5506]] |
| − | | + | * [[DETOX1-PWY-1]] |
| − | == Genes associated with this reaction ==
| + | * [[DETOX1-PWY]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_10876]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_9394]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[Tiso_gene_13394]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_135]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_7855]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_348]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_4191]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_136]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_500]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY66-388]], fatty acid α-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388] | + | |
| − | ** '''4''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]: | + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: reaction associated=CATAL-RXN}} |
| − | {{#set: common name=straight chain fatty acyl-CoA ligase}} | + | {{#set: pathway associated=PWY-5506|DETOX1-PWY-1|DETOX1-PWY}} |
| − | {{#set: common name=polyketide_synthase}}
| + | |
| − | {{#set: common name=long_chain_acyl-_synthetase}}
| + | |
| − | {{#set: common name=acyl-_synthetase}}
| + | |
| − | {{#set: common name=ORF}}
| + | |
| − | {{#set: ec number=EC-6.2.1.3}}
| + | |
| − | {{#set: gene associated=Tiso_gene_10876|Tiso_gene_9394|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_7855|Tiso_gene_348|Tiso_gene_4191|Tiso_gene_136|Tiso_gene_500}}
| + | |
| − | {{#set: in pathway=PWY66-388}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
