Difference between revisions of "RXN-17858"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.2.17-RXN 3.5.2.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxyisourate_hyd...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.2.17-RXN 3.5.2.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** methionine_aminopeptidase
+
** 5-hydroxyisourate_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
+
** [http://enzyme.expasy.org/EC/3.5.2.17 EC-3.5.2.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-methionyl-glycyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-glycine]][c]
+
** 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-5821]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-terminal-L-methionyl-glycyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal glycyl-[protein][c]
+
** 1 5-hydroxyisourate[c] '''+''' 1 H2O[c] '''=>''' 1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5715]]
+
* [[Tiso_gene_13181]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4247]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
* [[PWY-7394]], urate degradation to allantoin II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7394 PWY-7394]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5691]], urate degradation to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23736 23736]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06601 R06601]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=methionine_aminopeptidase}}
+
{{#set: common name=5-hydroxyisourate_hydrolase}}
−
{{#set: ec number=EC-3.4.11.18}}
+
{{#set: ec number=EC-3.5.2.17}}
−
{{#set: gene associated=Tiso_gene_5715|Tiso_gene_4247}}
+
{{#set: gene associated=Tiso_gene_13181}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: in pathway=PWY-7394|PWY-5691}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:40, 10 January 2018

Reaction 3.5.2.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5-hydroxyisourate_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-hydroxyisourate[c] + 1 H2O[c] => 1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7394, urate degradation to allantoin II: PWY-7394
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5691, urate degradation to allantoin I: PWY-5691
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






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