Difference between revisions of "PNPOXI-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XXLG oligosaccha...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** xyloglucan XXLG oligosaccharide β-galactosidase |
| + | ** glycoside_hydrolase | ||
| + | ** polyprotein | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | + | * With identifiers: | |
| − | + | ** 1 [[WATER]][c] '''+''' 1 [[CPD-13376]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c] | |
| − | + | * With common name(s): | |
| − | * [ | + | ** 1 H2O[c] '''+''' 1 XXLG xyloglucan oligosaccharide[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 1 D-galactopyranose[c] |
| − | * [ | + | |
| − | * [ | + | == Genes associated with this reaction == |
| − | * [ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [http://metacyc.org/META/NEW-IMAGE?object= | + | * [[Tiso_gene_1398]] |
| − | * [ | + | ** IN-SILICO_ANNOTATION |
| − | * [ | + | ***EC-NUMBER |
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | * [[Tiso_gene_12839]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_17558]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=xyloglucan XXLG oligosaccharide β-galactosidase}} |
| − | {{#set: | + | {{#set: common name=glycoside_hydrolase}} |
| − | {{#set: | + | {{#set: common name=polyprotein}} |
| − | {{#set: | + | {{#set: ec number=EC-3.2.1.23}} |
| + | {{#set: gene associated=Tiso_gene_1398|Tiso_gene_12839|Tiso_gene_17558}} | ||
| + | {{#set: in pathway=PWY-6807}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 17:52, 18 March 2018
Contents
Reaction RXN-12398
- direction:
- LEFT-TO-RIGHT
- common name:
- xyloglucan XXLG oligosaccharide β-galactosidase
- glycoside_hydrolase
- polyprotein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 CPD-13376[c] => 1 CPD-13375[c] + 1 D-galactopyranose[c]
- With common name(s):
- 1 H2O[c] + 1 XXLG xyloglucan oligosaccharide[c] => 1 XXXG xyloglucan oligosaccharide[c] + 1 D-galactopyranose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_1398
- IN-SILICO_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
- Tiso_gene_12839
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_17558
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
