Difference between revisions of "CPD-12016"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-171 RXN-171] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAMIN-PYROPHOSPHOKINASE-RXN THIAMIN-PYROPHOSPHOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-171 RXN-171] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAMIN-PYROPHOSPHOKINASE-RXN THIAMIN-PYROPHOSPHOKINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** thiamine_pyrophosphokinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
+
** [http://enzyme.expasy.org/EC/2.7.6.2 EC-2.7.6.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD1F-134]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-482]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[THIAMINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 gibberellin A9[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 gibberellin A51[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
+
** 1 thiamine[c] '''+''' 1 ATP[c] '''=>''' 1 thiamine diphosphate[c] '''+''' 1 H+[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3330]]
+
* [[Tiso_gene_16512]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
+
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6898]], thiamine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6898 PWY-6898]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11576 11576]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06337 R06337]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00619 R00619]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P35202 P35202]
 +
** [http://www.uniprot.org/uniprot/P41888 P41888]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.11}}
+
{{#set: common name=thiamine_pyrophosphokinase}}
−
{{#set: gene associated=Tiso_gene_3330}}
+
{{#set: ec number=EC-2.7.6.2}}
−
{{#set: in pathway=PWY-102}}
+
{{#set: gene associated=Tiso_gene_16512}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-6907|PWY-6898|PWY-7356|PWY-6908}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:53, 18 March 2018

Reaction THIAMIN-PYROPHOSPHOKINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiamine_pyrophosphokinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6907, thiamine diphosphate biosynthesis III (Staphylococcus): PWY-6907
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6898, thiamine salvage III: PWY-6898
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7356, thiamine salvage IV (yeast): PWY-7356
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6908, thiamine diphosphate biosynthesis IV (eukaryotes): PWY-6908
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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