Difference between revisions of "3.1.4.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8631 RXN-8631] == * direction: ** LEFT-TO-RIGHT * common name: ** fructose-bisphosphate_aldolas...")
(Created page with "Category:Gene == Gene Tiso_gene_11849 == * left end position: ** 5768 * transcription direction: ** POSITIVE * right end position: ** 7441 * centisome position: ** 77.1019...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8631 RXN-8631] ==
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== Gene Tiso_gene_11849 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5768
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* common name:
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* transcription direction:
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** fructose-bisphosphate_aldolase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.2.13 EC-4.1.2.13]
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** 7441
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* centisome position:
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** 77.10199   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[2.1.1.143-RXN]]
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** 1 [[FRU1P]][c] '''=>''' 1 [[GLYCERALD]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 β-D-fructofuranose 1-phosphate[c] '''=>''' 1 D-glyceraldehyde[c] '''+''' 1 glycerone phosphate[c]
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* [[RXN-4021]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_14568]]
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* [[PWY-2541]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7155]]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9118]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_65]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9119]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9179]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12272]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY66-373]], sucrose degradation V (sucrose α-glucosidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5768}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30851 30851]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7441}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02568 R02568]
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{{#set: centisome position=77.10199    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.1.1.143-RXN|RXN-4021}}
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{{#set: common name=fructose-bisphosphate_aldolase}}
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{{#set: pathway associated=PWY-2541|PWY-7155}}
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{{#set: ec number=EC-4.1.2.13}}
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{{#set: gene associated=Tiso_gene_14568|Tiso_gene_9118|Tiso_gene_65|Tiso_gene_9119|Tiso_gene_9179|Tiso_gene_12272}}
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{{#set: in pathway=PWY66-373}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:57, 18 March 2018

Gene Tiso_gene_11849

  • left end position:
    • 5768
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7441
  • centisome position:
    • 77.10199
  • Synonym(s):

Reactions associated

  • 2.1.1.143-RXN
    • in-silico_annotation
      • automated-name-match
  • RXN-4021
    • in-silico_annotation
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.1.4.1-RXN&oldid=20855"