Difference between revisions of "Tiso gene 11478"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLT GLT] == * smiles: ** C(CCC(C(=O)[O-])[N+])([O-])=O * inchi key: ** InChIKey=WHUUTDBJXJRKMK-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLLG oligosaccha...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLT GLT] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] ==
−
* smiles:
+
* direction:
−
** C(CCC(C(=O)[O-])[N+])([O-])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=WHUUTDBJXJRKMK-VKHMYHEASA-M
+
 
* common name:
 
* common name:
−
** L-glutamate
+
** xyloglucan XLLG oligosaccharide β-galactosidase
−
* molecular weight:
+
** glycoside_hydrolase
−
** 146.122   
+
** polyprotein
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
−
** 1-amino-propane-1,3-dicarboxylic acid
 
−
** glutacid
 
−
** glutaminic acid
 
−
** L-glutamic acid
 
−
** α-aminoglutaric acid
 
−
** E
 
−
** glt
 
−
** glu
 
−
** glut
 
−
** L-glu
 
−
** 2-aminopentanedioic acid
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[GLUTKIN-RXN]]
+
* With identifiers:
−
* [[GLUTAMATE-N-ACETYLTRANSFERASE-RXN]]
+
** 2 [[WATER]][c] '''+''' 1 [[CPD-13378]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 2 [[D-galactopyranose]][c]
−
* [[GLUTAMINESYN-RXN]]
+
* With common name(s):
−
* [[DIHYDROFOLATESYNTH-RXN]]
+
** 2 H2O[c] '''+''' 1 XLLG xyloglucan oligosaccharide[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 2 D-galactopyranose[c]
−
* [[6.1.1.24-RXN]]
+
 
−
* [[RME144]]
+
== Genes associated with this reaction  ==
−
* [[RXN-12878]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[GLUTCYSLIG-RXN]]
+
* [[Tiso_gene_12839]]
−
* [[GLURS-RXN]]
+
** IN-SILICO_ANNOTATION
−
* [[RXN0-2921]]
+
***EC-NUMBER
−
* [[HISTAMINOTRANS-RXN]]
+
* [[Tiso_gene_1398]]
−
* [[FORMYLTHFGLUSYNTH-RXN]]
+
** IN-SILICO_ANNOTATION
−
* [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
+
***EC-NUMBER
−
* [[TRANS-RXN-261]]
+
** [[pantograph]]-[[esiliculosus]]
−
* [[GLUTDECARBOX-RXN]]
+
* [[Tiso_gene_17558]]
−
* [[RXN-9386]]
+
** IN-SILICO_ANNOTATION
−
== Reaction(s) known to produce the compound ==
+
***EC-NUMBER
−
* [[CARBPSYN-RXN]]
+
== Pathways  ==
−
* [[RXN-14116]]
+
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
−
* [[GLUTAMIN-RXN]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[TRANS-RXN-261]]
+
== Reconstruction information  ==
−
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
+
* Category: [[orthology]]
−
* [[GMP-SYN-GLUT-RXN]]
+
** Source: [[orthology-esiliculosus]]
−
* [[GLUTAMATESYN-RXN]]
+
*** Tool: [[pantograph]]
−
* [[CTPSYN-RXN]]
+
* Category: [[annotation]]
−
* [[GLUTAMIDOTRANS-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[6.3.5.6-RXN]]
+
*** Tool: [[pathwaytools]]
−
* [[6.3.5.7-RXN]]
+
−
* [[PYRROLINECARBDEHYDROG-RXN]]
+
−
* [[1.5.1.9-RXN]]
+
−
* [[FGAMSYN-RXN]]
+
−
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
+
−
* [[ASNSYNB-RXN]]
+
−
* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
+
−
== Reaction(s) of unknown directionality ==
+
−
* [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
+
−
* [[RXN-11737]]
+
−
* [[RXN-6341]]
+
−
* [[2.6.1.7-RXN]]
+
−
* [[PSERTRANSAMPYR-RXN]]
+
−
* [[RXN-10721]]
+
−
* [[GLUTDEHYD-RXN]]
+
−
* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
+
−
* [[N-ACETYLTRANSFER-RXN]]
+
−
* [[ACETYLORNTRANSAM-RXN]]
+
−
* [[ALANINE-AMINOTRANSFERASE-RXN]]
+
−
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
−
* [[RXN-7737]]
+
−
* [[2.6.1.22-RXN]]
+
−
* [[ANTHRANSYN-RXN]]
+
−
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
+
−
* [[2-AMINOADIPATE-AMINOTRANSFERASE-RXN]]
+
−
* [[RXN-13698]]
+
−
* [[RXN-13697]]
+
−
* [[PSERTRANSAM-RXN]]
+
−
* [[PABASYN-RXN]]
+
−
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
+
−
* [[RXN-10814]]
+
−
* [[CYSTEINE-AMINOTRANSFERASE-RXN]]
+
−
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
+
−
* [[PRPPAMIDOTRANS-RXN]]
+
−
* [[ORNITHINE-GLU-AMINOTRANSFORASE-RXN]]
+
−
* [[RXN-15007]]
+
−
* [[GLYCINE-AMINOTRANSFERASE-RXN]]
+
−
* [[PROLINE-MULTI]]
+
−
* [[ASPAMINOTRANS-RXN]]
+
−
* [[PHEAMINOTRANS-RXN]]
+
−
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
+
−
* [[GABATRANSAM-RXN]]
+
−
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
+
 
== External links  ==
 
== External links  ==
−
* CAS : 56-86-0
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* METABOLIGHTS : MTBLC29985
+
{{#set: common name=xyloglucan XLLG oligosaccharide β-galactosidase}}
−
* PUBCHEM:
+
{{#set: common name=glycoside_hydrolase}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460299 5460299]
+
{{#set: common name=polyprotein}}
−
* KNAPSACK : C00001358
+
{{#set: ec number=EC-3.2.1.23}}
−
* HMDB : HMDB00148
+
{{#set: gene associated=Tiso_gene_12839|Tiso_gene_1398|Tiso_gene_17558}}
−
* LIGAND-CPD:
+
{{#set: in pathway=PWY-6807}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00025 C00025]
+
{{#set: reconstruction category=orthology|annotation}}
−
* CHEMSPIDER:
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
** [http://www.chemspider.com/Chemical-Structure.4573882.html 4573882]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
* CHEBI:
+
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29985 29985]
+
−
* BIGG : glu__L
+
−
{{#set: smiles=C(CCC(C(=O)[O-])[N+])([O-])=O}}
+
−
{{#set: inchi key=InChIKey=WHUUTDBJXJRKMK-VKHMYHEASA-M}}
+
−
{{#set: common name=L-glutamate}}
+
−
{{#set: molecular weight=146.122    }}
+
−
{{#set: common name=1-amino-propane-1,3-dicarboxylic acid|glutacid|glutaminic acid|L-glutamic acid|α-aminoglutaric acid|E|glt|glu|glut|L-glu|2-aminopentanedioic acid}}
+
−
{{#set: consumed by=GLUTKIN-RXN|GLUTAMATE-N-ACETYLTRANSFERASE-RXN|GLUTAMINESYN-RXN|DIHYDROFOLATESYNTH-RXN|6.1.1.24-RXN|RME144|RXN-12878|GLUTCYSLIG-RXN|GLURS-RXN|RXN0-2921|HISTAMINOTRANS-RXN|FORMYLTHFGLUSYNTH-RXN|FOLYLPOLYGLUTAMATESYNTH-RXN|TRANS-RXN-261|GLUTDECARBOX-RXN|RXN-9386}}
+
−
{{#set: produced by=CARBPSYN-RXN|RXN-14116|GLUTAMIN-RXN|TRANS-RXN-261|GLUTAMATE-SYNTHASE-NADH-RXN|GMP-SYN-GLUT-RXN|GLUTAMATESYN-RXN|CTPSYN-RXN|GLUTAMIDOTRANS-RXN|6.3.5.6-RXN|6.3.5.7-RXN|PYRROLINECARBDEHYDROG-RXN|1.5.1.9-RXN|FGAMSYN-RXN|GLUTAMATE-SYNTHASE-FERREDOXIN-RXN|ASNSYNB-RXN|5-OXOPROLINASE-ATP-HYDROLYSING-RXN}}
+
−
{{#set: consumed or produced by=3-SULFINOALANINE-AMINOTRANSFERASE-RXN|RXN-11737|RXN-6341|2.6.1.7-RXN|PSERTRANSAMPYR-RXN|RXN-10721|GLUTDEHYD-RXN|ORNITHINE-GLU-AMINOTRANSFERASE-RXN|N-ACETYLTRANSFER-RXN|ACETYLORNTRANSAM-RXN|ALANINE-AMINOTRANSFERASE-RXN|GLUTAMATE-DEHYDROGENASE-RXN|RXN-7737|2.6.1.22-RXN|ANTHRANSYN-RXN|L-GLN-FRUCT-6-P-AMINOTRANS-RXN|2-AMINOADIPATE-AMINOTRANSFERASE-RXN|RXN-13698|RXN-13697|PSERTRANSAM-RXN|PABASYN-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|RXN-10814|CYSTEINE-AMINOTRANSFERASE-RXN|TYROSINE-AMINOTRANSFERASE-RXN|PRPPAMIDOTRANS-RXN|ORNITHINE-GLU-AMINOTRANSFORASE-RXN|RXN-15007|GLYCINE-AMINOTRANSFERASE-RXN|PROLINE-MULTI|ASPAMINOTRANS-RXN|PHEAMINOTRANS-RXN|BRANCHED-CHAINAMINOTRANSFERILEU-RXN|GABATRANSAM-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
+

Revision as of 17:57, 18 March 2018

Reaction RXN-12400

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XLLG oligosaccharide β-galactosidase
    • glycoside_hydrolase
    • polyprotein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H2O[c] + 1 XLLG xyloglucan oligosaccharide[c] => 1 XXXG xyloglucan oligosaccharide[c] + 2 D-galactopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11478&oldid=20916"