Difference between revisions of "RIBOFLAVIN-SYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGDHe2r AKGDHe2r] == * direction: ** REVERSIBLE * common name: ** 2-oxoglutarate dehydrogenase E2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] == * direction: ** LEFT-TO-R...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGDHe2r AKGDHe2r] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2-oxoglutarate dehydrogenase E2 component
+
** 3-ketodihydrosphingosine_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.102 EC-1.1.1.102]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[CPD0-341]][m] '''+''' 1.0 [[CO-A]][m] '''+''' 1.0 [[PROTON]][m] '''<=>''' 1.0 [[DIHYDROLIPOAMIDE]][m] '''+''' 1.0 [[SUC-COA]][m]
+
** 1 [[NADPH]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13612]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 S-succinyl-dihydrolipoamide[m] '''+''' 1.0 coenzyme A[m] '''+''' 1.0 H+[m] '''<=>''' 1.0 dihydrolipoamide[m] '''+''' 1.0 succinyl-CoA[m]
+
** 1 NADPH[c] '''+''' 1 3-dehydrosphinganine[c] '''+''' 1 H+[c] '''=>''' 1 D-erythro-sphinganine[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10209]]
+
* [[Tiso_gene_18518]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=2-oxoglutarate dehydrogenase E2 component}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22640 22640]
−
{{#set: gene associated=Tiso_gene_10209}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=3-ketodihydrosphingosine_reductase}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: ec number=EC-1.1.1.102}}
 +
{{#set: gene associated=Tiso_gene_18518}}
 +
{{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:59, 18 March 2018

Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-ketodihydrosphingosine_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 3-dehydrosphinganine[c] + 1 H+[c] => 1 D-erythro-sphinganine[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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