Difference between revisions of "Tiso gene 10440"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OH2OXOGLUTARALDOL-RXN 4OH2OXOGLUTARALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OH2OXOGLUTARALDOL-RXN 4OH2OXOGLUTARALDOL-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
+
** [http://enzyme.expasy.org/EC/4.1.3.16 EC-4.1.3.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TMP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-15015]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dTDP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 dTMP[c] '''+''' 1 H+[c]
+
** 1 4-hydroxy-2-oxoglutarate[c] '''<=>''' 1 glyoxylate[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_20236]]
+
* [[Tiso_gene_12620]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_12899]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[HYDROXYPRODEG-PWY]], trans-4-hydroxy-L-proline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPRODEG-PWY HYDROXYPRODEG-PWY]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: common name=ORF}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00470 R00470]
−
{{#set: ec number=EC-3.6.1}}
+
* UNIPROT:
−
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
+
** [http://www.uniprot.org/uniprot/P44480 P44480]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P0A955 P0A955]
 +
** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
 +
** [http://www.uniprot.org/uniprot/O25729 O25729]
 +
** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
 +
** [http://www.uniprot.org/uniprot/O83578 O83578]
 +
** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
 +
** [http://www.uniprot.org/uniprot/P50846 P50846]
 +
** [http://www.uniprot.org/uniprot/P38448 P38448]
 +
** [http://www.uniprot.org/uniprot/Q55872 Q55872]
 +
** [http://www.uniprot.org/uniprot/P94802 P94802]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-4.1.3.16}}
 +
{{#set: gene associated=Tiso_gene_12620}}
 +
{{#set: in pathway=HYDROXYPRODEG-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:59, 18 March 2018

Reaction 4OH2OXOGLUTARALDOL-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-hydroxy-2-oxoglutarate[c] <=> 1 glyoxylate[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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