Difference between revisions of "CPD-12366"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** threonine_mitochond...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5131 RXN0-5131] == * direction: ** REVERSIBLE * common name: ** transposase * ec number: ** [h...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5131 RXN0-5131] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** threonine_mitochondrial
+
** transposase
−
** ORF
+
−
** serine_racemase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.3.1.19 EC-4.3.1.19]
+
** [http://enzyme.expasy.org/EC/2.7.7 EC-2.7.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THR]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[IS30-Insertion-Sequences]][c] '''<=>''' 1 [[IS30-with-Integrated-Transposon]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-threonine[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c]
+
** 1 an insertion sequence element IS30[c] '''<=>''' 1 an insertion sequence IS30 with integrated transposon[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17207]]
+
* [[Tiso_gene_5336]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8525]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12535]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22108 22108]
+
{{#set: common name=transposase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-2.7.7}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00996 R00996]
+
{{#set: gene associated=Tiso_gene_5336}}
−
* UNIPROT:
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P25306 P25306]
+
−
** [http://www.uniprot.org/uniprot/Q04513 Q04513]
+
−
** [http://www.uniprot.org/uniprot/P37946 P37946]
+
−
** [http://www.uniprot.org/uniprot/Q9JZW1 Q9JZW1]
+
−
** [http://www.uniprot.org/uniprot/Q02145 Q02145]
+
−
** [http://www.uniprot.org/uniprot/P66897 P66897]
+
−
** [http://www.uniprot.org/uniprot/Q9WYJ1 Q9WYJ1]
+
−
** [http://www.uniprot.org/uniprot/Q9PP95 Q9PP95]
+
−
** [http://www.uniprot.org/uniprot/P25379 P25379]
+
−
** [http://www.uniprot.org/uniprot/P00927 P00927]
+
−
** [http://www.uniprot.org/uniprot/P20506 P20506]
+
−
** [http://www.uniprot.org/uniprot/P0AGF6 P0AGF6]
+
−
** [http://www.uniprot.org/uniprot/P04968 P04968]
+
−
** [http://www.uniprot.org/uniprot/P20132 P20132]
+
−
** [http://www.uniprot.org/uniprot/P09367 P09367]
+
−
** [http://www.uniprot.org/uniprot/Q9RWU8 Q9RWU8]
+
−
** [http://www.uniprot.org/uniprot/Q9JUX5 Q9JUX5]
+
−
** [http://www.uniprot.org/uniprot/Q9ZD93 Q9ZD93]
+
−
** [http://www.uniprot.org/uniprot/P31212 P31212]
+
−
** [http://www.uniprot.org/uniprot/P36007 P36007]
+
−
** [http://www.uniprot.org/uniprot/P73375 P73375]
+
−
** [http://www.uniprot.org/uniprot/Q9T0D1 Q9T0D1]
+
−
** [http://www.uniprot.org/uniprot/Q39469 Q39469]
+
−
** [http://www.uniprot.org/uniprot/Q93968 Q93968]
+
−
** [http://www.uniprot.org/uniprot/Q9XAA4 Q9XAA4]
+
−
** [http://www.uniprot.org/uniprot/O94634 O94634]
+
−
** [http://www.uniprot.org/uniprot/O59791 O59791]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=threonine_mitochondrial}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=serine_racemase}}
+
−
{{#set: ec number=EC-4.3.1.19}}
+
−
{{#set: gene associated=Tiso_gene_17207|Tiso_gene_8525|Tiso_gene_12535}}
+
−
{{#set: in pathway=PWY66-428}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:00, 18 March 2018

Reaction RXN0-5131

  • direction:
    • REVERSIBLE
  • common name:
    • transposase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-12366&oldid=21185"