Difference between revisions of "RXN-1685"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_embr...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7822 PWY-7822] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.18.1.2-RXN 1.18.1.2-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7822 PWY-7822] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ferredoxin--nadp_embryochloroplastic
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** chitin degradation III (Serratia)
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** ferredoxin--nadp_root_isozyme_chloroplastic
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* ec number:
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** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][e] '''+''' 1 [[NADP]][c] '''=>''' 2 [[Oxidized-ferredoxins]][e] '''+''' 1 [[NADPH]][c]
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* [[3.2.1.14-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[e] '''+''' 1 NADP+[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[e] '''+''' 1 NADPH[c]
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*** [[Tiso_gene_10265]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12625]]
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* [[Tiso_gene_20055]]
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** 2 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_1129]]
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***EC-NUMBER
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*** [[Tiso_gene_14122]]
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* [[Tiso_gene_20168]]
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** 2 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_20054]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12309 RXN-12309]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18079 RXN-18079]
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** EXPERIMENTAL_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18080 RXN-18080]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18083 RXN-18083]
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* [[Tiso_gene_19031]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18084 RXN-18084]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17170]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17381]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230]
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** '''1''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01195 R01195]
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{{#set: common name=chitin degradation III (Serratia)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
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{{#set: total reaction=7}}
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{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
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{{#set: completion rate=29.0}}
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{{#set: ec number=EC-1.18.1.2}}
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{{#set: gene associated=Tiso_gene_20055|Tiso_gene_20168|Tiso_gene_20054|Tiso_gene_19031|Tiso_gene_17170|Tiso_gene_17381}}
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{{#set: in pathway=PWY-7230|PWY-101}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:00, 18 March 2018

Pathway PWY-7822

  • taxonomic range:
  • common name:
    • chitin degradation III (Serratia)
  • Synonym(s):

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-1685&oldid=21210"