Difference between revisions of "PWY-361"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** acyl...")
(Created page with "Category:Gene == Gene Tiso_gene_19622 == * left end position: ** 203 * transcription direction: ** POSITIVE * right end position: ** 2037 * centisome position: ** 9.385114...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] ==
+
== Gene Tiso_gene_19622 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 203
−
* common name:
+
* transcription direction:
−
** polyketide_synthase
+
** POSITIVE
−
** acyl-_synthetase
+
* right end position:
−
** ORF
+
** 2037
−
** long_chain_acyl-_synthetase
+
* centisome position:
−
* ec number:
+
** 9.385114   
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[RXN-11839]]
−
** 1 [[CPD-3617]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-10267]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 decanoate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 decanoyl-CoA[c]
+
* [[RXN-11840]]
−
 
+
** in-silico_annotation
−
== Genes associated with this reaction  ==
+
***automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-11841]]
−
* [[Tiso_gene_7855]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***automated-name-match
−
***EC-NUMBER
+
* [[RXN-11842]]
−
* [[Tiso_gene_136]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***automated-name-match
−
***EC-NUMBER
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
−
* [[Tiso_gene_135]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***automated-name-match
−
***EC-NUMBER
+
** experimental_annotation
−
* [[Tiso_gene_9394]]
+
***automated-name-match
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_13394]]
+
== Pathways associated ==
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_348]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4191]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=203}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: right end position=2037}}
−
{{#set: common name=ORF}}
+
{{#set: centisome position=9.385114    }}
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: reaction associated=RXN-11839|RXN-11840|RXN-11841|RXN-11842|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
−
{{#set: ec number=EC-6.2.1.3}}
+
−
{{#set: gene associated=Tiso_gene_7855|Tiso_gene_136|Tiso_gene_135|Tiso_gene_9394|Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_348|Tiso_gene_4191}}
+
−
{{#set: in pathway=PWY-7094}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:00, 18 March 2018

Gene Tiso_gene_19622

  • left end position:
    • 203
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2037
  • centisome position:
    • 9.385114
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-361&oldid=21231"