Difference between revisions of "PWY-6823"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SULFO-CYSTEINE SULFO-CYSTEINE] == * smiles: ** C(C([N+])C(=O)[O-])SS([O-])(=O)=O * inchi key: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-RXN RIBOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** at1g17160 ** rib...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SULFO-CYSTEINE SULFO-CYSTEINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-RXN RIBOKIN-RXN] ==
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* smiles:
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* direction:
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** C(C([N+])C(=O)[O-])SS([O-])(=O)=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=NOKPBJYHPHHWAN-REOHCLBHSA-M
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* common name:
 
* common name:
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** S-sulfo-L-cysteine
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** ORF
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* molecular weight:
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** at1g17160
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** 200.204   
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** ribokinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
 
* Synonym(s):
 
* Synonym(s):
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** S-sulfocysteine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[ATP]][c] '''+''' 1 [[CPD-10330]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15318]][c]
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* [[SULFOCYS-RXN]]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 α-D-ribofuranose[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 α-D-ribose 5-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17974]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_911]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18204]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_82]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_81]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7682]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RIBOKIN-PWY]], ribose degradation: [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-PWY RIBOKIN-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203408 25203408]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13697 13697]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62225 62225]
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** [http://www.genome.jp/dbget-bin/www_bget?R01051 R01051]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C05824 C05824]
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** [http://www.uniprot.org/uniprot/P44331 P44331]
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* HMDB : HMDB00731
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** [http://www.uniprot.org/uniprot/P36945 P36945]
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{{#set: smiles=C(C([N+])C(=O)[O-])SS([O-])(=O)=O}}
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** [http://www.uniprot.org/uniprot/Q57849 Q57849]
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{{#set: inchi key=InChIKey=NOKPBJYHPHHWAN-REOHCLBHSA-M}}
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** [http://www.uniprot.org/uniprot/Q9CF42 Q9CF42]
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{{#set: common name=S-sulfo-L-cysteine}}
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** [http://www.uniprot.org/uniprot/P25332 P25332]
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{{#set: molecular weight=200.204    }}
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** [http://www.uniprot.org/uniprot/P0A9J6 P0A9J6]
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{{#set: common name=S-sulfocysteine}}
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** [http://www.uniprot.org/uniprot/O93727 O93727]
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{{#set: consumed or produced by=SULFOCYS-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=at1g17160}}
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{{#set: common name=ribokinase}}
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{{#set: ec number=EC-2.7.1.15}}
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{{#set: gene associated=Tiso_gene_17974|Tiso_gene_911|Tiso_gene_18204|Tiso_gene_82|Tiso_gene_81|Tiso_gene_7682}}
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{{#set: in pathway=RIBOKIN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:00, 18 March 2018

Reaction RIBOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • at1g17160
    • ribokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 α-D-ribofuranose[c] => 1 ADP[c] + 1 H+[c] + 1 α-D-ribose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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