Difference between revisions of "TRNAs-containing-epoxy-quenosine"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | ** [http:// | + | * ec number: |
| − | + | ** [http://enzyme.expasy.org/EC/2.4.1.223 EC-2.4.1.223] | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == Reaction | + | == Reaction Formula == |
| − | + | * With identifiers: | |
| − | * [[ | + | ** 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c] |
| − | * [[ | + | * With common name(s): |
| − | * [[ | + | ** 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 H+[c] '''+''' 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] |
| − | == | + | |
| − | * [ | + | == Genes associated with this reaction == |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | * | + | * [[Tiso_gene_10445]] |
| − | * [ | + | ** [[pantograph]]-[[esiliculosus]] |
| − | * [ | + | * [[Tiso_gene_8143]] |
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | * [[Tiso_gene_4321]] | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558] | ||
| + | ** '''3''' reactions found over '''13''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | * | + | * LIGAND-RXN: |
| − | ** [http:// | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07397 R07397] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: ec number=EC-2.4.1.223}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_10445|Tiso_gene_8143|Tiso_gene_4321}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6558}} |
| − | {{#set: | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: | + | {{#set: reconstruction source=orthology-esiliculosus}} |
| − | {{#set: | + | {{#set: reconstruction tool=pantograph}} |
| − | + | ||
Revision as of 18:01, 18 March 2018
Contents
Reaction 2.4.1.223-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GlcA-Gal-Gal-Xyl-Proteins[c] + 1 UDP-N-ACETYL-D-GLUCOSAMINE[c] => 1 PROTON[c] + 1 GlcNAc-GlcA-Gal-Gal-Xyl-Protein[c] + 1 UDP[c]
- With common name(s):
- 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] + 1 UDP-N-acetyl-α-D-glucosamine[c] => 1 H+[c] + 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] + 1 UDP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
- 3 reactions found over 13 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
External links
- LIGAND-RXN:
