Difference between revisions of "Tiso gene 4175"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** TCA cycle I (prokaryotic)
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** beta-lactamase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
 
* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
 
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** citric acid cycle
 
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** Krebs cycle
 
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** Szent-Gyorgyi-Krebs cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''7''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 3 [[WATER]][c] '''+''' 2 [[CPD-12259]][c] '''=>''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12230]][c] '''+''' 4 [[D-ALANINE]][c]
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* [[ACONITATEHYDR-RXN]]
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* With common name(s):
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* [[CITSYN-RXN]]
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** 3 H2O[c] '''+''' 2 a peptidoglycan dimer (S. aureus)[c] '''=>''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 a peptidoglycan with D,D cross-link (S. aureus)[c] '''+''' 4 D-alanine[c]
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* [[FUMHYDR-RXN]]
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* [[ISOCITDEH-RXN]]
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== Genes associated with this reaction  ==
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* [[MALATE-DEH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCCCOASYN-RXN]]
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* [[Tiso_gene_18870]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
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* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TCA TCA]
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{{#set: common name=beta-lactamase}}
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* ARACYC:
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{{#set: ec number=EC-3.4.16.4}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=TCA TCA]
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{{#set: gene associated=Tiso_gene_18870}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=PWY-5265}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=TCA cycle I (prokaryotic)}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction found=7}}
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{{#set: reaction not found=10}}
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{{#set: completion rate=70.0}}
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Revision as of 19:01, 18 March 2018

Reaction RXN-11065

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-lactamase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 3 H2O[c] + 2 a peptidoglycan dimer (S. aureus)[c] => 1 di-trans,octa-cis-undecaprenyl diphosphate[c] + 1 H+[c] + 1 a peptidoglycan with D,D cross-link (S. aureus)[c] + 4 D-alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5265, peptidoglycan biosynthesis II (staphylococci): PWY-5265
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4175&oldid=21361"