Difference between revisions of "CPD-2183"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSDECARB-RXN P-PANTOCYSDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTYRASE-RXN GUANIDINOBUTYRASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSDECARB-RXN P-PANTOCYSDECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTYRASE-RXN GUANIDINOBUTYRASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.36 EC-4.1.1.36]
+
** [http://enzyme.expasy.org/EC/3.5.3.7 EC-3.5.3.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''=>''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CPD-592]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 R-4'-phosphopantothenoyl-L-cysteine[c] '''=>''' 1 4'-phosphopantetheine[c] '''+''' 1 CO2[c]
+
** 1 4-guanidinobutanoate[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 4-aminobutanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15171]]
+
* [[Tiso_gene_4415]]
−
** [[pantograph]]-[[athaliana]]
+
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
+
* [[PWY-7523]], L-arginine degradation XII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7523 PWY-7523]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
+
* [[PWY-5742]], L-arginine degradation IX (arginine:pyruvate transaminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5742 PWY-5742]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGDEG-IV-PWY]], L-arginine degradation VIII (arginine oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-IV-PWY ARGDEG-IV-PWY]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16793 16793]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19501 19501]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03269 R03269]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01990 R01990]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.1.36}}
+
{{#set: ec number=EC-3.5.3.7}}
−
{{#set: gene associated=Tiso_gene_15171}}
+
{{#set: gene associated=Tiso_gene_4415}}
−
{{#set: in pathway=COA-PWY-1|COA-PWY}}
+
{{#set: in pathway=PWY-7523|PWY-5742|ARGDEG-IV-PWY|ARGDEG-V-PWY}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
−
{{#set: reconstruction source=synechocystis|athaliana}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:02, 18 March 2018

Reaction GUANIDINOBUTYRASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-guanidinobutanoate[c] + 1 H2O[c] => 1 urea[c] + 1 4-aminobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7523, L-arginine degradation XII: PWY-7523
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5742, L-arginine degradation IX (arginine:pyruvate transaminase pathway): PWY-5742
    • 1 reactions found over 4 reactions in the full pathway
  • ARGDEG-IV-PWY, L-arginine degradation VIII (arginine oxidase pathway): ARGDEG-IV-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • ARGDEG-V-PWY, L-arginine degradation X (arginine monooxygenase pathway): ARGDEG-V-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-2183&oldid=21389"