Difference between revisions of "RXN-12490"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17919 RXN-17919] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligase_mrna_capping_enz...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9386 RXN-9386] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17919 RXN-17919] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9386 RXN-9386] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
+
* ec number:
** dna_ligase_mrna_capping_enzyme
+
** [http://enzyme.expasy.org/EC/6.1.1.24 EC-6.1.1.24]
** dna_ligase
+
** ORF
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[GLT]][c] '''+''' 1 [[GLN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a [DNA]-3'-hydroxyl[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] '''=>''' 1 H+[c] '''+''' 1 DNAn[c] '''+''' 1 AMP[c]
+
** 1 L-glutamate[c] '''+''' 1 a tRNAgln[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 an L-glutamyl-[tRNAGln][c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_12142]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_14249]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_3498]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_11251]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_6743]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_14250]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5921 PWY-5921]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[annotation]]
** [[pathwaytools]]:
+
** Source: [[annotation-experimental_annotation]]
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=dna_ligase_mrna_capping_enzyme}}
+
{{#set: ec number=EC-6.1.1.24}}
{{#set: common name=dna_ligase}}
+
{{#set: in pathway=PWY-5921}}
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_12142|Tiso_gene_14249|Tiso_gene_3498|Tiso_gene_11251|Tiso_gene_6743|Tiso_gene_14250}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 18:02, 18 March 2018

Reaction RXN-9386

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 a tRNAgln[c] + 1 ATP[c] => 1 AMP[c] + 1 an L-glutamyl-[tRNAGln][c] + 1 diphosphate[c]

Genes associated with this reaction

Pathways

  • PWY-5921, glutaminyl-tRNAgln biosynthesis via transamidation: PWY-5921
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links