Difference between revisions of "Tiso gene 568"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7418 CPD-7418] == * smiles: ** C(C=CC1(=C(C=CC=C1)O))(=O)[O-] * inchi key: ** InChIKey=PMOW...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7418 CPD-7418] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C=CC1(=C(C=CC=C1)O))(=O)[O-]
 +
* inchi key:
 +
** InChIKey=PMOWTIHVNWZYFI-WAYWQWQTSA-M
 
* common name:
 
* common name:
−
** 2,3,4-saturated fatty acyl-CoA synthetase
+
** coumarinate
−
** polyketide_synthase
+
* molecular weight:
−
** long_chain_acyl-_synthetase
+
** 163.152   
−
** acyl-_synthetase
+
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
−
** Acyl-activating enzyme
+
** coumarinic acid
−
** Fatty acid thiokinase (long-chain)
+
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-8037]]
−
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD66-39]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[RXN-8036]]
−
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 a 2,3,4-saturated fatty acid[c] '''=>''' 1 AMP[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c]
+
== Reaction(s) of unknown directionality ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4191]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_348]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* PUBCHEM:
−
** [http://www.uniprot.org/uniprot/P18163 P18163]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54714352 54714352]
−
** [http://www.uniprot.org/uniprot/P39518 P39518]
+
* HMDB : HMDB41592
−
** [http://www.uniprot.org/uniprot/O51162 O51162]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P39002 P39002]
+
** [http://www.genome.jp/dbget-bin/www_bget?C05838 C05838]
−
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
+
** [http://www.chemspider.com/Chemical-Structure.20118034.html 20118034]
−
** [http://www.uniprot.org/uniprot/O83181 O83181]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=47921 47921]
−
** [http://www.uniprot.org/uniprot/P94547 P94547]
+
* METABOLIGHTS : MTBLC47921
−
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
+
{{#set: smiles=C(C=CC1(=C(C=CC=C1)O))(=O)[O-]}}
−
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
+
{{#set: inchi key=InChIKey=PMOWTIHVNWZYFI-WAYWQWQTSA-M}}
−
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
+
{{#set: common name=coumarinate}}
−
** [http://www.uniprot.org/uniprot/P44446 P44446]
+
{{#set: molecular weight=163.152    }}
−
** [http://www.uniprot.org/uniprot/O30039 O30039]
+
{{#set: common name=coumarinic acid}}
−
** [http://www.uniprot.org/uniprot/O51539 O51539]
+
{{#set: consumed by=RXN-8037}}
−
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
+
{{#set: produced by=RXN-8036}}
−
** [http://www.uniprot.org/uniprot/P33121 P33121]
+
−
** [http://www.uniprot.org/uniprot/P33124 P33124]
+
−
** [http://www.uniprot.org/uniprot/P30624 P30624]
+
−
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
+
−
** [http://www.uniprot.org/uniprot/P69451 P69451]
+
−
** [http://www.uniprot.org/uniprot/P69452 P69452]
+
−
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
+
−
** [http://www.uniprot.org/uniprot/P47912 P47912]
+
−
** [http://www.uniprot.org/uniprot/P73004 P73004]
+
−
** [http://www.uniprot.org/uniprot/O81614 O81614]
+
−
** [http://www.uniprot.org/uniprot/O15840 O15840]
+
−
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
+
−
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
+
−
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
+
−
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
+
−
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
+
−
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
+
−
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
+
−
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
+
−
** [http://www.uniprot.org/uniprot/O60135 O60135]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
+
−
{{#set: common name=polyketide_synthase}}
+
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
−
{{#set: common name=acyl-_synthetase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-6.2.1.3}}
+
−
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
+
−
{{#set: gene associated=Tiso_gene_500|Tiso_gene_10876|Tiso_gene_9394|Tiso_gene_4191|Tiso_gene_136|Tiso_gene_7855|Tiso_gene_135|Tiso_gene_348|Tiso_gene_13394}}
+
−
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:02, 18 March 2018

Metabolite CPD-7418

  • smiles:
    • C(C=CC1(=C(C=CC=C1)O))(=O)[O-]
  • inchi key:
    • InChIKey=PMOWTIHVNWZYFI-WAYWQWQTSA-M
  • common name:
    • coumarinate
  • molecular weight:
    • 163.152
  • Synonym(s):
    • coumarinic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(C=CC1(=C(C=CC=C1)O))(=O)[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_568&oldid=21483"