Difference between revisions of "SUC"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
** [http://enzyme.expasy.org/EC/1.3.1.77 EC-1.3.1.77]
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* common name:
 +
** NAD biosynthesis I (from aspartate)
 
* Synonym(s):
 
* Synonym(s):
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** nicotinamide adenine dinucleotide biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[PELARGONIDIN-CMPD]][c] '''+''' 2 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-10413]][c]
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* [[L-ASPARTATE-OXID-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 pelargonidin[c] '''+''' 2 NADPH[c] '''+''' 3 H+[c] '''=>''' 2 NADP+[c] '''+''' 1 (-)-epiafzelechin[c]
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*** [[Tiso_gene_7285]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
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* [[NICONUCADENYLYLTRAN-RXN]]
* [[Tiso_gene_9504]]
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** 1 associated gene(s):
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_6231]]
* [[Tiso_gene_15272]]
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** 1 reconstruction source(s) associated:
** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
== Pathways  ==
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* [[QUINOPRIBOTRANS-RXN]]
* [[PWY-6035]], 2,3-cis-flavanols biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035]
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** 4 associated gene(s):
** '''3''' reactions found over '''3''' reactions in the full pathway
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*** [[Tiso_gene_8723]]
== Reconstruction information  ==
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*** [[Tiso_gene_141]]
* [[orthology]]:
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*** [[Tiso_gene_140]]
** [[pantograph]]:
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*** [[Tiso_gene_12892]]
*** [[esiliculosus]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-NH3-RXN NAD-SYNTH-NH3-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=QUINOLINATE-SYNTHA-RXN QUINOLINATE-SYNTHA-RXN]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* ECOCYC:
** [http://www.genome.jp/dbget-bin/www_bget?R06541 R06541]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
{{#set: ec number=EC-1.3.1.77}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
{{#set: gene associated=Tiso_gene_9504|Tiso_gene_15272}}
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{{#set: taxonomic range=TAX-2759}}
{{#set: in pathway=PWY-6035}}
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{{#set: taxonomic range=TAX-2}}
{{#set: reconstruction category=orthology}}
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{{#set: common name=NAD biosynthesis I (from aspartate)}}
{{#set: reconstruction tool=pantograph}}
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{{#set: common name=nicotinamide adenine dinucleotide biosynthesis}}
{{#set: reconstruction source=esiliculosus}}
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{{#set: reaction found=3}}
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{{#set: total reaction=6}}
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{{#set: completion rate=50.0}}

Revision as of 18:03, 18 March 2018

Pathway PYRIDNUCSYN-PWY

  • taxonomic range:
  • common name:
    • NAD biosynthesis I (from aspartate)
  • Synonym(s):
    • nicotinamide adenine dinucleotide biosynthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links