Difference between revisions of "RXN-646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** glyoxylate cycle
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** Methylacrylyl-CoA hydratase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** glyoxylate bypass
 
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** glyoxylate shunt
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''6''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 1 [[CPD-12173]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[METHACRYLYL-COA]][c]
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* [[ACONITATEHYDR-RXN]]
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* With common name(s):
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* [[CITSYN-RXN]]
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** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 methylacrylyl-CoA[c]
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* [[ISOCIT-CLEAV-RXN]]
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* [[MALATE-DEH-RXN]]
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== Genes associated with this reaction  ==
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* [[MALSYN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_14262]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14257]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5857]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16145]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31175 31175]
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* METACYC:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
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{{#set: taxonomic range=TAX-2157}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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{{#set: common name=glyoxylate cycle}}
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** [http://www.uniprot.org/uniprot/O29814 O29814]
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{{#set: common name=glyoxylate bypass|glyoxylate shunt}}
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** [http://www.uniprot.org/uniprot/O29299 O29299]
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{{#set: reaction found=6}}
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** [http://www.uniprot.org/uniprot/O34893 O34893]
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{{#set: reaction not found=6}}
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** [http://www.uniprot.org/uniprot/O23520 O23520]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P76082 P76082]
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** [http://www.uniprot.org/uniprot/P64016 P64016]
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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** [http://www.uniprot.org/uniprot/O53419 O53419]
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** [http://www.uniprot.org/uniprot/P94549 P94549]
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** [http://www.uniprot.org/uniprot/Q13825 Q13825]
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** [http://www.uniprot.org/uniprot/P45361 P45361]
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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** [http://www.uniprot.org/uniprot/P14604 P14604]
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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** [http://www.uniprot.org/uniprot/P34559 P34559]
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
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** [http://www.uniprot.org/uniprot/P55100 P55100]
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** [http://www.uniprot.org/uniprot/P53526 P53526]
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** [http://www.uniprot.org/uniprot/Q39659 Q39659]
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** [http://www.uniprot.org/uniprot/O52797 O52797]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Methylacrylyl-CoA hydratase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Tiso_gene_14262|Tiso_gene_14257|Tiso_gene_5857|Tiso_gene_6885|Tiso_gene_16145}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:03, 18 March 2018

Reaction METHYLACYLYLCOA-HYDROXY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Methylacrylyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxy-isobutanoyl-CoA[c] <=> 1 H2O[c] + 1 methylacrylyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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