Difference between revisions of "Trans-delta2-lignoceroyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6543 PWY-6543] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** 4-aminobenzoate biosynthesis
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** formamidopyrimidine-dna_glycosylase
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** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
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** n-glycosylase_dna_lyase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23]
 
* Synonym(s):
 
* Synonym(s):
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** pABA biosynthesis
 
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** plastidial PABA biosynthesis
 
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** PABA biosynthesis in plastids
 
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** p-aminobenzoate biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[ADCLY-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''=>''' 1 [[CPD-16491]][c] '''+''' 1 [[DNA-containing-aPurinic-Sites]][c]
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* [[PABASYN-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 H2O[c] '''+''' 1 a ring-opened 7-methylguanine in DNA[c] '''=>''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c] '''+''' 1 an apurinic site within DNA[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1280]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9068]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16992]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14609]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6558]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* UNIPROT:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6543 PWY-6543]
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** [http://www.uniprot.org/uniprot/P44948 P44948]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/P57014 P57014]
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/P05523 P05523]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P19210 P19210]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/P74290 P74290]
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{{#set: common name=4-aminobenzoate biosynthesis}}
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** [http://www.uniprot.org/uniprot/O69470 O69470]
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{{#set: common name=pABA biosynthesis|plastidial PABA biosynthesis|PABA biosynthesis in plastids|p-aminobenzoate biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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{{#set: reaction not found=2}}
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{{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}}
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{{#set: completion rate=100.0}}
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{{#set: common name=n-glycosylase_dna_lyase}}
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{{#set: ec number=EC-3.2.2.23}}
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{{#set: gene associated=Tiso_gene_1280|Tiso_gene_9068|Tiso_gene_16992|Tiso_gene_14609|Tiso_gene_6558}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:03, 18 March 2018

Reaction 3.2.2.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formamidopyrimidine-dna_glycosylase
    • endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
    • n-glycosylase_dna_lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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