Difference between revisions of "ACETATE--COA-LIGASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15692 CPD-15692] == * smiles: ** CCCCCCC=CCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28889 TAX-2...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15692 CPD-15692] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] ==
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* smiles:
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* taxonomic range:
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** CCCCCCC=CCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28889 TAX-28889]
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* inchi key:
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** InChIKey=CQGVNMQHZQJNII-ZJZQAHHTSA-J
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* common name:
 
* common name:
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** 3-trans-decenoyl-CoA
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** 3-hydroxypropanoate/4-hydroxybutanate cycle
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* molecular weight:
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** 915.738   
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* Synonym(s):
 
* Synonym(s):
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** 3E-decenoyl-CoA
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** 3-HP/4-HB cycle
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** 3-hydroxypropionate/4-hydroxybutyrate cycle
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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== Reaction(s) known to produce the compound ==
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'''8''' reactions found over '''16''' reactions in the full pathway
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* [[RXN-14803]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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== Reaction(s) of unknown directionality ==
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** 3 associated gene(s):
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_17451]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_7965]]
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*** [[Tiso_gene_2812]]
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*** [[Tiso_gene_5029]]
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*** [[Tiso_gene_3800]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[METHYLMALONYL-COA-MUT-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_9771]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5029]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-11002]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN-11662]]
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** 7 associated gene(s):
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_16703]]
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*** [[Tiso_gene_14027]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11667]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5857]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN-6383]]
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** 3 associated gene(s):
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_16703]]
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*** [[Tiso_gene_14257]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8890 RXN-8890]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8891 RXN-8891]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9092 RXN-9092]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: taxonomic range=TAX-28889}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657610 90657610]
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{{#set: common name=3-hydroxypropanoate/4-hydroxybutanate cycle}}
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* CHEBI:
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{{#set: common name=3-HP/4-HB cycle|3-hydroxypropionate/4-hydroxybutyrate cycle}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=84793 84793]
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{{#set: reaction found=8}}
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{{#set: smiles=CCCCCCC=CCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: total reaction=16}}
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{{#set: inchi key=InChIKey=CQGVNMQHZQJNII-ZJZQAHHTSA-J}}
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{{#set: completion rate=50.0}}
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{{#set: common name=3-trans-decenoyl-CoA}}
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{{#set: molecular weight=915.738    }}
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{{#set: common name=3E-decenoyl-CoA}}
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{{#set: produced by=RXN-14803}}
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Revision as of 18:05, 18 March 2018

Pathway PWY-5789

  • taxonomic range:
  • common name:
    • 3-hydroxypropanoate/4-hydroxybutanate cycle
  • Synonym(s):
    • 3-HP/4-HB cycle
    • 3-hydroxypropionate/4-hydroxybutyrate cycle

Reaction(s) found

8 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ACETATE--COA-LIGASE-RXN&oldid=21782"