Difference between revisions of "PWY-5384"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** nucleoside_diphosp...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-313 CPD-313] == * smiles: ** C(CC[N+])[N+] * inchi key: ** InChIKey=XFNJVJPLKCPIBV-UHFFFAOY...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-313 CPD-313] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(CC[N+])[N+]
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* inchi key:
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** InChIKey=XFNJVJPLKCPIBV-UHFFFAOYSA-P
 
* common name:
 
* common name:
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** ORF
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** propane-1,3-diamine
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** nucleoside_diphosphate_kinase
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* molecular weight:
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** adenylate_kinase_domain-containing_protein_1
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** 76.141   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* Synonym(s):
 
* Synonym(s):
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** trimethylenediamine
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** 1,3-propanediamine
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** 1,3-diaminopropane
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** 1,3-DAP
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-6381]]
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** 1 [[ATP]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GTP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-13415]]
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** 1 ATP[c] '''+''' 1 GDP[c] '''=>''' 1 ADP[c] '''+''' 1 GTP[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16529]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_17272]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18224]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9290]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_195]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17271]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 109-76-2
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27686 27686]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=4030255 4030255]
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** [http://www.genome.jp/dbget-bin/www_bget?R00330 R00330]
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* HMDB : HMDB00002
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=ORF}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00986 C00986]
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{{#set: common name=nucleoside_diphosphate_kinase}}
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* CHEMSPIDER:
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{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
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** [http://www.chemspider.com/Chemical-Structure.3247103.html 3247103]
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{{#set: ec number=EC-2.7.4.6}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_16529|Tiso_gene_17272|Tiso_gene_18224|Tiso_gene_9290|Tiso_gene_195|Tiso_gene_17271}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57484 57484]
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{{#set: in pathway=PWY-7221|PPGPPMET-PWY}}
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* METABOLIGHTS : MTBLC57484
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{{#set: reconstruction category=orthology}}
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{{#set: smiles=C(CC[N+])[N+]}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=XFNJVJPLKCPIBV-UHFFFAOYSA-P}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: common name=propane-1,3-diamine}}
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{{#set: reconstruction category=manual}}
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{{#set: molecular weight=76.141    }}
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{{#set: reconstruction source=primary_network}}
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{{#set: common name=trimethylenediamine|1,3-propanediamine|1,3-diaminopropane|1,3-DAP}}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=RXN-6381}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: produced by=RXN-13415}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:05, 18 March 2018

Metabolite CPD-313

  • smiles:
    • C(CC[N+])[N+]
  • inchi key:
    • InChIKey=XFNJVJPLKCPIBV-UHFFFAOYSA-P
  • common name:
    • propane-1,3-diamine
  • molecular weight:
    • 76.141
  • Synonym(s):
    • trimethylenediamine
    • 1,3-propanediamine
    • 1,3-diaminopropane
    • 1,3-DAP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 109-76-2
  • PUBCHEM:
  • HMDB : HMDB00002
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57484
"C(CC[N+])[N+" cannot be used as a page name in this wiki.




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