Difference between revisions of "PWY-699"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** beta-glucosidase-lik...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** ORF
 +
** beta-glucosidase-like_chloroplastic
 +
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
 +
** beta_glucosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CPD-11641]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-182]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxystearoyl-[acp][c] '''=>''' 1 a trans-octadec-2-enoyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 4-methylumbelliferyl glucoside[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 4-methylumbelliferone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_135]]
+
* [[Tiso_gene_5836]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_6884]]
 
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_10876]]
+
* [[Tiso_gene_2344]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_15067]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_136]]
+
* [[Tiso_gene_6188]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_500]]
+
* [[Tiso_gene_6007]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_13394]]
+
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2843]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_6497]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13306]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13305]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8669]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15066]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3467]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10001]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_6187]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[primary_network]]
+
** Source: [[orthology-esiliculosus]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
* Category: [[annotation]]
−
*** [[experimental_annotation]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: common name=beta-glucosidase-like_chloroplastic}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
−
{{#set: gene associated=Tiso_gene_135|Tiso_gene_6884|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394}}
+
{{#set: common name=beta_glucosidase}}
−
{{#set: in pathway=PWY-5989|PWY3O-355}}
+
{{#set: ec number=EC-3.2.1.21}}
−
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=Tiso_gene_5836|Tiso_gene_2344|Tiso_gene_15067|Tiso_gene_6188|Tiso_gene_6007|Tiso_gene_2843|Tiso_gene_6497|Tiso_gene_13306|Tiso_gene_13305|Tiso_gene_8669|Tiso_gene_15066|Tiso_gene_3467|Tiso_gene_10001|Tiso_gene_6187}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:06, 18 March 2018

Reaction RXN-10769

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • beta-glucosidase-like_chloroplastic
    • low_quality_protein:_beta-glucosidase-like_chloroplastic-like
    • beta_glucosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-methylumbelliferyl glucoside[c] + 1 H2O[c] => 1 D-glucopyranose[c] + 1 4-methylumbelliferone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-699&oldid=21978"